Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0030 ATGAACATCTTCACCAAGAAACCCACCTCCAAAGAGGCTCTTAGGGAGAGTAAACGAGAAATGGCAACAGCTACTAGAGGTATAGAGAGGGAAATTGGAGGATTACAATTGGAAGAAAAGAAGCTTGTTGCCGAGATAAAGAGAACTGCTAAGACAGGAAATGAGGCGGCCACTAAAGTTCTAGCTCGCCAGCTAGTCAGGCTTAGGCAACATATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCGACTCACACACAGGCAATGCATGCCCATTCTTCTGTTGCTGTTGGCATGAAAGGAGCTAGTAAGGCAATGGCAGCTATGAATAAGCAAATGGCGCCTGAAAAGCAAGCAAAAGTTATGCGGGATTTCCAGAAACAATCGGCACAGATGGATATGACTACTGAAATGATGTCAGATGCTATAGATGATGCCATAGATGATGATGAAGCTGAAGAGGAAACTGATGAGCTCACAAATCAAGTCCTTGACGAAATTGGTGTGGATATTGCCTCACAGTTATCAACAGCTCCCAAAGGGAGAGTCACAACAAAGAACACAGAAAATGTTGGCAGCTCGGGCATTGATGACCTTGAAAAGCGTTTGGCGGCTCTTAGAAACCCATAA 639 0.446 MNIFTKKPTSKEALRESKREMATATRGIEREIGGLQLEEKKLVAEIKRTAKTGNEAATKVLARQLVRLRQHIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGASKAMAAMNKQMAPEKQAKVMRDFQKQSAQMDMTTEMMSDAIDDAIDDDEAEEETDELTNQVLDEIGVDIASQLSTAPKGRVTTKNTENVGSSGIDDLEKRLAALRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0030 212 MobiDBLite consensus disorder prediction 180 197 - -
Lal20g0030 212 Gene3D - 4 181 - -
Lal20g0030 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
Lal20g0030 212 MobiDBLite consensus disorder prediction 1 22 - -
Lal20g0030 212 MobiDBLite consensus disorder prediction 179 200 - -
Lal20g0030 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Lal20g0030 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0030 Lal-Chr20 216385 222019 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0030 K12192 - gmx:100306343 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0030 20 216385 222019 Lal20g0030 20 216385 222019 ECH