Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0015 ATGGCTAAATCAATCCCAATCACACTGATTCCTTTTCCCAAAACCCATCAATCTTCTTTCAAATCCAATCACCCTAAATTCCAAGCACCACCACCTTTCATCTCTAAAACTATAACCACAAATACAAAATCCATTTTTACATGCAATTCCAACTCTTGTTTATCTTCCACAATCAATGACCTCGAAGCTCCACAACAAAAACAAAGTTATAAACCAGATATAGCAAATGTTTGGCGAAAAATCCATGGCCAAGACAACTGGGTTGGGCTTTTGGATCCAATGAACCCTGTTTTGAGGACAGAGCTGATCCGCTATGGTGAGATGACTCAAGCATGCTATGATGCTTTTGACTATGACCCATACTCTAAGTATTGTGGTGGTAGCAGGTATTCACTCCAAGAATTCTTCGAGTCTCTAAACATGACCTACCTTGGCTACACGGCCACGCGCTTCCTCTACACCACCGCGAATGTTAACCTACCAAAATTCTTCAAGAAGTCACGGTGGCCAGACAAGTTGTGGAGTCCACACGCTAACTGGGCAGGTTACATCGCCGTATCTGATGATGTCACGACCAAGGCACTTGGTCGTAGGGACATCATCATATCATGGCGAGGAACGGTGACAAATGTGGAGTGGGTAGCTGACCTAACGAATATTCTGAAACCTCTATCAAAAGATATACCAAATTGTACGGACGAAAAGATTAAGATAGAAGCGGGTTTCTTGGATCTGTACACTGATAGGGAGAAGGTCTGCGGCTACTGCAAGTATTCTGCTAGGCAACAGGTCCTCGGAGAGGTGAAAAGATTGGTGGAGAAGTACCCTAACGATGAACTAAGCATTACCATAACAGGGCATAGCTTAGGGAGTGCATTGGCTATACTGAATGCATATGACATAGCGGAAACAAAGCTGAACGTAGCAAAGAATGGGAAGAAGATACATGTTTCGGTGTTTTCATATTCGGGGCCAAGGGTAGGGAACTTGAGGTTCAAAAATAGACTGGAGAATGAGTTAGGTGTGAAGGTGTTAAGGGTTCACAATACTCATGATTTGGTACCAAAGTCACCAGGGCTTATATTAAATGAGACTATGCCATCTTGGTTCCTGAATTTGGCGCAAGATTTCCCTTGGTGTTACACTCATGTTGGGGAGGAGTTGGAGTTGGATCACAAGAAATCTCCCCACTTAAACCCTAATGGTGATAGTGCATGTGCTCATAACTTGGAAGCTCATTTGCATTTGATTGATGGATTCCATGGGAAGAATGATGAATTTAAGCTAACAACTGGGAGAGACCTTGCTCTTGTGAACAAGGGTAGTGACTTTCTAGTAGATGCTCTTGCGGTGCCACCAAGTTGGAGGCAAGAATTGAACAAGAACATGGCCCTCACTGAAGAAGGAAGGTGGGTGCAAGCTGAGCGCACAAAACTTGAAGATCACCCTGAAGATATTGATTTCCATCTCAAACAACTAGGCCTTGCTGCCCCATGA 1497 0.4375 MAKSIPITLIPFPKTHQSSFKSNHPKFQAPPPFISKTITTNTKSIFTCNSNSCLSSTINDLEAPQQKQSYKPDIANVWRKIHGQDNWVGLLDPMNPVLRTELIRYGEMTQACYDAFDYDPYSKYCGGSRYSLQEFFESLNMTYLGYTATRFLYTTANVNLPKFFKKSRWPDKLWSPHANWAGYIAVSDDVTTKALGRRDIIISWRGTVTNVEWVADLTNILKPLSKDIPNCTDEKIKIEAGFLDLYTDREKVCGYCKYSARQQVLGEVKRLVEKYPNDELSITITGHSLGSALAILNAYDIAETKLNVAKNGKKIHVSVFSYSGPRVGNLRFKNRLENELGVKVLRVHNTHDLVPKSPGLILNETMPSWFLNLAQDFPWCYTHVGEELELDHKKSPHLNPNGDSACAHNLEAHLHLIDGFHGKNDEFKLTTGRDLALVNKGSDFLVDALAVPPSWRQELNKNMALTEEGRWVQAERTKLEDHPEDIDFHLKQLGLAAP 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0015 498 Gene3D alpha/beta hydrolase 77 486 IPR029058 -
Lal20g0015 498 SUPERFAMILY alpha/beta-Hydrolases 158 419 IPR029058 -
Lal20g0015 498 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 1 493 - -
Lal20g0015 498 CDD Lipase_3 132 392 - -
Lal20g0015 498 PANTHER PHOSPHOLIPASE A1 1 493 - -
Lal20g0015 498 Pfam Lipase (class 3) 201 359 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0015 Lal-Chr20 129530 136170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g0015 57 498 Acyl Lipid Metabolism Gene Families AT2G30550 58.837 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0015 - - gmx:100815007 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0015 20 129530 136170 Lal24g0139 24 1008116 1012839 PCT
Lal24g0139 24 1008116 1012839 Lal20g0015 20 129530 136170 PCT