Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0008 ATGGTTATTATTCCAAATTTATTACTATTATTATTAGCATTAATCTACGGCGGCAGGGGTACAATGTCAATGTGGTCGTTAATGAGTAATTTCCTCCACCAAGCTGGTGGCACCGCGGTGATAGACGGCGGTTTGGCGACGGAGCTGGAACGTCACGGCGCAGACCTGAACGATCCACTTTGGAGCGCCAAATGCCTCCTCTCATCATCTCACCTCATTCGGCAGGTACACCTTGATTACTTGGAAAATGGTGCAGATATTATAATCACTGCATCTTATCAGGCCAGTCTGGCTACAATTCAAGGTTTTAAAGCAAAAGGGTTTTCTAATGAGGAAAGTGAAGCCTTACTGAGAAAGAGTGTTGAAATTGCTTGTGAGGCTCGCAATGTCTATAATGAAAAATGTGCAAAAGGGTTTTCCTCTGATGCCATAATCCTTAAACACCGTTCCATACTAATTGCAGCATCGGTTGGGAGCTATGGAGCTTATTTGGCTGATGGATCAGAGTACAGTGGGGATTATGGTGCTTCTATCACCGTCCAAACTCTTAAAGATTTTCATCGAAGGAGAGTTCAAATTTTAGCAGATTCAGGTGCTGACCTCCTTGCATTTGAAACAGTGCCTAATAAAATTGAAGCTCAGGCTTATGCAGAGCTTCTAGAAGAAGAGGACATAAAGATTCCAGCATGGTTTTCATTTAACTCAAAAGATGGAATTAATGTTGTTAGTGGTGATTCTTTACTGGAATGTGGCTCCATTGCTGAATCATGCAACAAAGTCGTTGCTGTTGGAATCAACTGTACCCCACCTAGATTTGTGCACGAGCTGATAGTATTGCTTAAGAAGGTAGAACCTCAGGTCTCTACAAAACCAATTGTTATATATCCAAACAGTGGGGAAAGTTATGATGCTGACCTAAAGGAGTGGGTGCAAAATACAGGTGTTACAGATGAAGATTTTGTCTCCTATGTAAACAAATGGTGTGAGGTAGGGGCTTCCCTTGTAGGTGGCTGTTGCAGGACAACACCAGCTACTATTAGAGGGATATACAGGACACTCTCCAAGCAGTAA 1071 0.4248 MVIIPNLLLLLLALIYGGRGTMSMWSLMSNFLHQAGGTAVIDGGLATELERHGADLNDPLWSAKCLLSSSHLIRQVHLDYLENGADIIITASYQASLATIQGFKAKGFSNEESEALLRKSVEIACEARNVYNEKCAKGFSSDAIILKHRSILIAASVGSYGAYLADGSEYSGDYGASITVQTLKDFHRRRVQILADSGADLLAFETVPNKIEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECGSIAESCNKVVAVGINCTPPRFVHELIVLLKKVEPQVSTKPIVIYPNSGESYDADLKEWVQNTGVTDEDFVSYVNKWCEVGASLVGGCCRTTPATIRGIYRTLSKQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0008 356 PANTHER ZGC:172121 24 355 - -
Lal20g0008 356 ProSiteProfiles Homocysteine-binding domain profile. 27 353 IPR003726 -
Lal20g0008 356 Gene3D - 28 351 IPR036589 -
Lal20g0008 356 Pfam Homocysteine S-methyltransferase 40 351 IPR003726 -
Lal20g0008 356 PANTHER HOMOCYSTEINE S-METHYLTRANSFERASE 2 24 355 - -
Lal20g0008 356 PIRSF BHMT 293 356 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lal20g0008 356 PIRSF BHMT 30 223 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lal20g0008 356 SUPERFAMILY Homocysteine S-methyltransferase 35 355 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0008 Lal-Chr20 69465 73089 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0008 K00547 - gmx:100790567 544.658