Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0006 ATGAATGATACTACAAAAATGAGTAAGACCGAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCATCTCCCCACAGCACCAAGTTTGAAGATTTAGTGAAGAAATTAAAACGCTTGAACCCTCTTGAACCTTGTTTCGCAATACTCTTCTTCACCCTTCTCTTCATTGCTTCTTTCTTATGCCTTCACTATACTTCTATTCTTCACACTCCCACTTTCCATTCTTCTTTGCCTTCTGTTCAGTTTGATGATACTGATTACTGTGATGTCTTTCATGGAAACTGGGTTTGGGATGATACTTATCCACTATACACTTCTCAAAATTGTTCCTTTTTGGATCAAGGTTTTCGATGCTATCAGAATGGTAGACCTGATACTTTCTACACCAAGTGGAGATGGCAACCTCAAAACTGCAACTTGCCCAGATTTGATGCAAATAATATGTTGGAAAAGCTACGGGGTAAGCGGCTTGTTTTTGTAGGAGATTCAATTGGAAGGAACCAATGGGAATCCCTTCTCTGTATGCTCTCTTCTTCCGTAACGAACAAGAGTACTATCTATGAGGTTAATGGGAGCCCAATCTCAAGGCACACAGGCTTCTTGGCATTCAAGTTTGAACATTTCAACTGTACAATCGAATACTACAGATCACCATTTCTAGTAGTACAGGGACGCCCTCCTCTTCGATCACCTCAACATGTCAAATTGACTTTGAGAGTGGACCATATGGACTGGACTTCTTTTCACTGGAGGGATGCAGATGTGCTAGTTCTCAATGCTGCACATTGGTGGAATTATGAAAAGACACTCAAAATGGGTTGTTACTTCCAAGTTGGAGAGGAAGTGAAGAAGAATATGACTATAGAAGATGCATATAGAAAATCAGTCGAGACAGTAATTGATTGGATCACCGCCGAAGTAAACATGAACAAAACTTATGTTCTTTTCCGAACTTATTCTCCTGTTCATTTCAGGGGTGGTGAATGGAACAGTGGTGGTGGTTGTAACTTGGAAACACTCCCTGATTTAGGGTCCTTGGCGACATTATCGGACATTCACTTCACGACCATATTTGATGTGTTGTCAGAGCGAATGAATAAATCAAAAGTGATGTTGAATTTGGACTTGCTAAATGTGACAGAAATGTCATTGCGGAGAAAAGACGGTCATGCATCTATTTATTATGTTGGGCCGAACAGCACAGCATCTATGATGAAGCAAGACTGTAGTCATTGGTGCCTACCTGGTGTACCTGATTCATGGAATGAGATTCTTTATGCACTTCTTCTTAAGCGGGACACTTATGGTGAAAGGAATGCAACAAAAGTTCCAGTGTAG 1359 0.4032 MNDTTKMSKTETSSSSSSSSSSSSSSSSSSPHSTKFEDLVKKLKRLNPLEPCFAILFFTLLFIASFLCLHYTSILHTPTFHSSLPSVQFDDTDYCDVFHGNWVWDDTYPLYTSQNCSFLDQGFRCYQNGRPDTFYTKWRWQPQNCNLPRFDANNMLEKLRGKRLVFVGDSIGRNQWESLLCMLSSSVTNKSTIYEVNGSPISRHTGFLAFKFEHFNCTIEYYRSPFLVVQGRPPLRSPQHVKLTLRVDHMDWTSFHWRDADVLVLNAAHWWNYEKTLKMGCYFQVGEEVKKNMTIEDAYRKSVETVIDWITAEVNMNKTYVLFRTYSPVHFRGGEWNSGGGCNLETLPDLGSLATLSDIHFTTIFDVLSERMNKSKVMLNLDLLNVTEMSLRRKDGHASIYYVGPNSTASMMKQDCSHWCLPGVPDSWNEILYALLLKRDTYGERNATKVPV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0006 452 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 44 442 IPR029962 GO:0016413
Lal20g0006 452 MobiDBLite consensus disorder prediction 1 33 - -
Lal20g0006 452 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 44 442 - -
Lal20g0006 452 Pfam PMR5 N terminal Domain 95 146 IPR025846 -
Lal20g0006 452 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 147 434 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0006 Lal-Chr20 60925 64912 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0006 - - gmx:100779356 650.973