Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g2040 ATGGCAACTCTTTTTCCAAAGAAACCCAACAAGAATATCTCAAAACTTTACCTCATTACCTTAATCAGTATTCTCTGCACCTTTTCCTACCTTATCGGTCTATGGCATAATTCTCCCACCGCCGCAATCTCCGGTCAATATTACACCGCCACTGATGGCGGCGTTGACTGTCCACATCTTAATTCCACCCCCATTTCCAACCTACCAACCAAACCCACCACAAATCTTGACTTCTCCGCACACCACCACCTATCAGACCCTTTACCCAATACAGCGCGTGTTTTCAACGCGCCACCTTGCAACGTGTCGCTATCAGAGTACACGCCATGCGAGGACGTGCAGAGATCACTGAAGTTCCCACGAGAGAATCTGATATACCGGGAGAGGCACTGTCCTGAGGCGGACGAGGTTTTGAAGTGCCGGATTCCGGCACCGTATGGGTACAGAATTCCGTTCCGGTGGCCGGAAAGCCGTGACTCGGTTTGGTATGCGAATGTTCCTCACAAGGAGTTGACGATAGAGAAGAAGAACCAGAATTGGGTCAGGTATGAAGGAGAACGGTTAAAGTTCCCCGGCGGTGGAACCATGTTTCCACGCGGCGCAAGTGCGTATATTGATGATATCGGAGCATTGATTAACCTTAAAGATGGGTCCATCAGAACTGCCTTAGACACCGGTTGTGGGGTTGCAAGTTGGGGAGCTTATCTTCTGTCACGTGACATTTTAGCAGTGTCATTTGCACCAAGAGACACACATGAAGCTCAAGTTCAATTTGCTCTTGAACGTGGAGTTCCTGCATTGATTGGTGTTATTGCTTCAATCAGACTTCCTTACCCTTCAAGAGCCTTTGACATTGCTCACTGCTCACGTTGCCTCATTCCTTGGGGACAGAATGATGGAATTTATTTGACTGAAGTTGATAGAGTCCTACGCCCCGGTGGGTACTGGATTCTATCAGGGCCACCAATAAACTGGCAGAGGCACTGGAAAGGTTGGGAAAGGACTACTGAGAGTCTCAAAGTTGAACAAGAAGGAATTGAGAAAGTGGCAAAAAGTCTATGCTGGAAAAAATTGAAACAGAAGGAAGATCTTGCAATATGGCAAAAACCAAATAATCATATACATTGTAAAAGAACCAGAAAGATCTTCAAGAATAGGCCTTTCTGTGAGAAACAGGAACTAGACACAGCATGGTACACTAAAATGGATACATGCTTGACACCGTTGCCGAAGGTAAAGGGCATCCGAGATGTTAGTGGTGGGAAACTATCCAATTGGCCTCAGAGACTAACATCAATTCCGCCAAGGATTAGTAGTGGAAGCTTGGAAGGAATTACAGCTGAGATTTTCGAAGAGAATACTGAGTTATGGAAGAAGAGAGTAGCATACTACAAGACGGTCGACTATCAGCTAGCAGAGCGCGGAAGATACCGAAATCTGCTTGACATGAATGCTTATTTGGGAGGCTTTGCAGCTGCACTTAATGATGATCCAGTATGGGTCATGAACATGGTGCCTGTTGAGTCTGAGGTCAACACCCTTGGTGTCATTTATGAACGTGGATTGATTGGAACCTATCAAAACTGGTGTGAAGCTATGTCTACATACCCAAGAACTTATGACTTCATACATGGTGATTCAATTTTTAGTTTATACCAGAACAGATGTAAAATGGAGGACATTCTCCTTGAGATGGATCGGATTCTTCGGCCGCAAGGTAGCGTGATTTTGCGCAACGATGTCGATGTGTTGTTGAAGGTGAAGAGGATTGCAGATGCATTGCAATGGGATACAAGAATTGCAGACCATGAAAATGGACCTCTCCAGAGAGAAAAGATATTGTTAGCAGTTAAACAGTATTGGACAGCTCAACCAAGTGATGAAAATTAA 1890 0.4513 MATLFPKKPNKNISKLYLITLISILCTFSYLIGLWHNSPTAAISGQYYTATDGGVDCPHLNSTPISNLPTKPTTNLDFSAHHHLSDPLPNTARVFNAPPCNVSLSEYTPCEDVQRSLKFPRENLIYRERHCPEADEVLKCRIPAPYGYRIPFRWPESRDSVWYANVPHKELTIEKKNQNWVRYEGERLKFPGGGTMFPRGASAYIDDIGALINLKDGSIRTALDTGCGVASWGAYLLSRDILAVSFAPRDTHEAQVQFALERGVPALIGVIASIRLPYPSRAFDIAHCSRCLIPWGQNDGIYLTEVDRVLRPGGYWILSGPPINWQRHWKGWERTTESLKVEQEGIEKVAKSLCWKKLKQKEDLAIWQKPNNHIHCKRTRKIFKNRPFCEKQELDTAWYTKMDTCLTPLPKVKGIRDVSGGKLSNWPQRLTSIPPRISSGSLEGITAEIFEENTELWKKRVAYYKTVDYQLAERGRYRNLLDMNAYLGGFAAALNDDPVWVMNMVPVESEVNTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSIFSLYQNRCKMEDILLEMDRILRPQGSVILRNDVDVLLKVKRIADALQWDTRIADHENGPLQREKILLAVKQYWTAQPSDEN 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g2040 629 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 329 IPR029063 -
Lal1g2040 629 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 626 IPR004159 GO:0008168
Lal1g2040 629 PANTHER GENERIC METHYLTRANSFERASE 5 626 - -
Lal1g2040 629 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 106 618 IPR004159 GO:0008168
Lal1g2040 629 Gene3D Vaccinia Virus protein VP39 187 391 IPR029063 -
Lal1g2040 629 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 384 582 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g2040 Lal-Chr1 22537183 22543630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g2040 - - gmx:100794369 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g2040 1 22537183 22543630 Lal6g0917 6 6360231 6366913 PCT
Lal6g0917 6 6360231 6366913 Lal1g2040 1 22537183 22543630 PCT