Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1945 ATGGGTTTTACTAAGAAACCCATATTCCTTCCTTTTTTCTTGATTTTATTCACACATCATCTAAACCCACCTAATCTTACAGAATCTGCTTCTGATTTCACTACCTTAGTCTACAAAGGCTGTTCAAAACAAACATTCACAGATCCAAATGGACAATACTCACAAGCACTTTCATCACTATTTGGTTCATTAGTAGAACAATCAACCAAAACCAAGTTCTATAAAGTCACAACTGGCACTGGCCAAAACAGCATAACTGGGCTTTTCCAATGCAGAGAAGATCTCACTAACTCAGATTGCTACACCTGCATCAGCATGCTCCCAGTTTTATCTGACAAACTCTGTGGCAAAACCATATCTGCAAGAATTCAGCTCCTAGGTTGTTACCTTCTCTATGAGGTTGCTGGGTTTTCTCAAACTTCTGGGATGCAGTTTCTGTACAAGACTTGTGGTGCATCAAATTCTGCTGGGAAAGGGTTTGAAGAGAGAAGGGACACTGCATTATCTGTGGTGGGAAATGGTGTTGTTAGTGGTCATGGTTTTTATACAAGTAGCTACCAGAATGTGTATGTGATGGGTCAATGTGAGGGTGACGTTGGTGATTCAGATTGTGGAGAGTGTGTCAAAATTGCTGTTCAGAGAGCTCAAGTTGAATGTGGTAGTTCCATTTCAGGCCAAGTTTTTCTGCAAAAGTGCTTCATTAGTTATAACTATTATCCGAATGGGGTTCCTTCTAGATCATCATCTTCTGCTGCATCATCATCTTCTTCATACTCTTCATTTTCTTCAGGGCAAAATAAAGGGAAGACTATAGCTATAATTGTAGGAGGGGTAGCTGGGGTGGCTTTGTTGGTGATATTCCTGTTATTTTTTAGGAGTTTGAAGAAGAAACATGATGATTATTGA 906 0.3962 MGFTKKPIFLPFFLILFTHHLNPPNLTESASDFTTLVYKGCSKQTFTDPNGQYSQALSSLFGSLVEQSTKTKFYKVTTGTGQNSITGLFQCREDLTNSDCYTCISMLPVLSDKLCGKTISARIQLLGCYLLYEVAGFSQTSGMQFLYKTCGASNSAGKGFEERRDTALSVVGNGVVSGHGFYTSSYQNVYVMGQCEGDVGDSDCGECVKIAVQRAQVECGSSISGQVFLQKCFISYNYYPNGVPSRSSSSAASSSSSYSSFSSGQNKGKTIAIIVGGVAGVALLVIFLLFFRSLKKKHDDY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1945 301 Gene3D - 33 137 IPR038408 -
Lal1g1945 301 Gene3D - 142 240 IPR038408 -
Lal1g1945 301 PANTHER PLASMODESMATA-LOCATED PROTEIN 2 6 300 - -
Lal1g1945 301 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 300 - -
Lal1g1945 301 Pfam Salt stress response/antifungal 41 133 IPR002902 -
Lal1g1945 301 Pfam Salt stress response/antifungal 154 237 IPR002902 -
Lal1g1945 301 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Lal1g1945 301 ProSiteProfiles Gnk2-homologous domain profile. 142 241 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1945 Lal-Chr1 21568706 21572826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1945 13 286 Receptor kinase-like Gene Family AT5G40380 25.694 1.91e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1945 - - gmx:100775289 435.261