Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1935 ATGGCGAGTATTGGAGATATTAGTGTTTCTGCAGCCATAAACTTGTTGTCAGCATTGGCATTCCTAGTGGCATTTGCAATATTGAGGCTTCAGCCATTCAATGATCGTGTCTATTTCCCAAAATGGTATCTAAAAGGGATAAGAGGGAGTCCAAGTGGTTCATCTTCATATGTAAAGAAATTTGTTAACCTTGACTTTAGAACCTATATCACTTTTCTCAATTGGATGCCTGCAGCATTGCATATGCCAGAACCTGAGCTTATTGAACATGCAGGCCTTGACTCTGCCGTCTATATTCGCATTTATATTCTTGGGTCAGCAATCATTCCCTTCTTATCTATATTCTTGGACTTTTTCACAACTATATATCTAATAATGCTTTATCCTAAAATACACAGCATGAAAATATTTACCCCAATTACCCTACTTGCTTTTATGGTTTTGGTTCCTGTTAATTGGACCGGGAAAACATTGGAGGCACCTGCAGCCAAAGATTTGACATTTAGTGATGTTGACAAGATTTCAATATCAAACATTCCATTTGGATCAAAGAGGTTCTGGGTGCATATTGCTATGTCCTATGTCTTCTCATTTTGGACATGTTATAGTCTTTACAAGGAATACCAGAATGTATCAGGAATGAGATTGCGATTTTTGGCATCTGAACGTCGTCGTCCAGACCAATTTACAGTCCTTGTGAGTAATGTTCCCCCAGACCCTGATGAATCAGTCAGTGAGCACATCGAACATTTTTTCTGTGTCAACCATCCTGATCACTATCTCATGCATCAAGTTGTTTATAATGCGAACAAGCTTGCATCAATAGTTGCAAGCAAGAAGAAATTGCAAAACTGGTATCTTTACTACCAAAACAAATATGAAAAAGATCCTTCAAAGAGGCCAACTACTCGGACAGGTTTTCTTGGTCTATTGGGAACTAAAGTTGATGCTATTGATCATTACACTTCTCTAATTGATACATTGAGCAAACAAGAAGAGGAAGAAAGAAAAAATGTTACAAAAGATCCAAAGGCTGTTGTTCCTGCAGCATTTGTTTCATTCAAAAGTCGATGGGGGGCAGCTGTGTGCGCTCAAACTCAACAAACTAGTAATCCAACCATTTGGCTCACAGACTGGGCTCCTGAGCCTAGGGATGTCTATTGGGAAAATCTTGCAATCCCATATTTTGATCTCAATCTTCGGAGATTGCTCATGGCTGTTTCTGTATTTTTTCTAACTTTCTTCTTCATGATACCAATAGCATTGGTTCAATCTCTTGCCAACATTGAGGCCATTGAGAAGGTCCTTCCTTTCCTGGAGCCAATAATTGAAAAGTTCACAAAAACTGTTGGAAGTACAATCCCTATGAAAGCTACATTCTTCATCACATATATAATGGTGGATGGATGGGCTGGAATAGCTGCAGAGATTCTTAGGTTAGCTCCTTTGATTACATTCCATCTGAAAAACACATTCTTGGTGAAGACAGAACAAGACAGGGAGAATGCTATGGATCCTGGTAGCTTGGAATTTGCTACATCTGAACCTCGCATACAGCTATATTTCATGCTAGGCCATGTCTATTCTCCAGTCACACCTTTTCTTCTCCCCTTCATTGTTGTCTTCTTTGCTTTTTCTTACATGGTCTTTCGACATCAGATCATCAATGTATATAACCAGCAATATGAGAGTGGAGCAACGTTTTGGCCTGACGTGCACCGTCGAGTAATAATTGGCTTGGTTATATCGCAACTTCTTCTGATGGGATTGTTGAGTACAAGAGGTGCAAATATGTCGACATTGGTGCTTATAGCACAACCTGTGTTGACAATTTGGTTTCACAGATATTGCAAAGGACGATTCGAACCAGCATTTGTTCAATTCCCACTAGAGGATGCAATGGTGAAGGATACACTAGAAAGGGCAGTAGAACCAAACCTGAACCTGAGACAGTATCTTCAAGATGCATATATACATCCTGTATTTAAAGGTGATGAGATGGAAAAACCATCATTGATTGATGAAGAAGAGGACAATCCACTTATTCAAACAAAAAGATCTTCTCGAATAGGTAGTAAGCCTGAATCTGATAATGAAGGTGGTAGCAGTTGGTAA 2115 0.3929 MASIGDISVSAAINLLSALAFLVAFAILRLQPFNDRVYFPKWYLKGIRGSPSGSSSYVKKFVNLDFRTYITFLNWMPAALHMPEPELIEHAGLDSAVYIRIYILGSAIIPFLSIFLDFFTTIYLIMLYPKIHSMKIFTPITLLAFMVLVPVNWTGKTLEAPAAKDLTFSDVDKISISNIPFGSKRFWVHIAMSYVFSFWTCYSLYKEYQNVSGMRLRFLASERRRPDQFTVLVSNVPPDPDESVSEHIEHFFCVNHPDHYLMHQVVYNANKLASIVASKKKLQNWYLYYQNKYEKDPSKRPTTRTGFLGLLGTKVDAIDHYTSLIDTLSKQEEEERKNVTKDPKAVVPAAFVSFKSRWGAAVCAQTQQTSNPTIWLTDWAPEPRDVYWENLAIPYFDLNLRRLLMAVSVFFLTFFFMIPIALVQSLANIEAIEKVLPFLEPIIEKFTKTVGSTIPMKATFFITYIMVDGWAGIAAEILRLAPLITFHLKNTFLVKTEQDRENAMDPGSLEFATSEPRIQLYFMLGHVYSPVTPFLLPFIVVFFAFSYMVFRHQIINVYNQQYESGATFWPDVHRRVIIGLVISQLLLMGLLSTRGANMSTLVLIAQPVLTIWFHRYCKGRFEPAFVQFPLEDAMVKDTLERAVEPNLNLRQYLQDAYIHPVFKGDEMEKPSLIDEEEDNPLIQTKRSSRIGSKPESDNEGGSSW 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1935 704 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 445 691 IPR045122 GO:0005227
Lal1g1935 704 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 132 445 IPR045122 GO:0005227
Lal1g1935 704 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 3 114 IPR045122 GO:0005227
Lal1g1935 704 MobiDBLite consensus disorder prediction 684 704 - -
Lal1g1935 704 MobiDBLite consensus disorder prediction 668 704 - -
Lal1g1935 704 Pfam Calcium-dependent channel, 7TM region, putative phosphate 445 591 IPR003864 GO:0016020
Lal1g1935 704 Pfam Cytosolic domain of 10TM putative phosphate transporter 228 390 IPR027815 -
Lal1g1935 704 Pfam Late exocytosis, associated with Golgi transport 7 115 IPR032880 -
Lal1g1935 704 Pfam Late exocytosis, associated with Golgi transport 133 207 IPR032880 -
Lal1g1935 704 MobiDBLite consensus disorder prediction 668 683 - -
Lal1g1935 704 PANTHER OS05G0393800 PROTEIN 445 691 - -
Lal1g1935 704 PANTHER OS05G0393800 PROTEIN 3 114 - -
Lal1g1935 704 PANTHER OS05G0393800 PROTEIN 132 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1935 Lal-Chr1 21490369 21494696 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1935 K21989 - qsu:111998757 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1935 1 21490369 21494696 Lal1g1935 1 21490369 21494696 ECH