Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1923 ATGGAAGAAACAGAAGCAACAGAAGTGGCACCCGCTCTCATAGCGGTTCATCCTCACCGTTCCTCCGTTGTCGTCGCCGTTGGATACGACCTCCGCGTCTTCGACCTTCTCGCTGGTGTTGGAGTTACTTTACTGGACGACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCATAAGGATTCAATCAGAGCCATTCGTTTCAGTGCAAATGGAAAACTCTTTGTTTCTGCCGGTGATGATAAGACTCTCAAGATTTGGTCTCCAATCTCTTGGCGCTGCATTTTCACTCTGTCCTCTGAAAAGAGAATCAGTGCAGTTGCCATAAGCAACGATGAATCTTATGTGTGTTTTGCTGACAAATTCGGGGTTGTTTGGGTTGTGGATATCACTGGCTTTGATGCCAATCAACCATTACTTTATAAGAAACCAACACCCCTTCTTTCTCACTACTGCAGTATCATCACTAGCTTGGAATTTTCCCCAGACGATCGGTTTATTTTGAGTGCCGATCGAGATTTTAAAATTCGCGTTACTAATTTTCCTAAGAAGCCATTAAATGGAGCTCATGAGATACAAAGTTTGTCTCTTGCCTTGCTTTCTTTCAAGCTCAGGAATGCCAGCAACACCTTCTTTCTGGCAGTGGTCCAGTTGTGGGATGTCTCATCTGGAGCACTCCTAGATACTTGTGAGGTTGCTAATAAGGCAGGACTTTTAGAGTCTAATGGTAATGGTAAATCAGAGGAGCATGGCCATGCTGTTACTGATTTATGCACTACCCTGGATGGTTTGCTTGTTGCAGTGGCTATTCAAAGGCAATTTAATGCAACTTTCCTGAAAAGTTTTATTTTATACCACTGTAGCTTGCAAGGAATAGCGTTGTTGAGCTGCAATGTTTCTGCACAGACACTTACCCTTGCCAAGGTGGTTTCTTTTGACGGAGAGGCCTTTGTCCCTACCTGCTTGGGTTATGCCTCCTCTGCTAGGGAATTGTGGATAGTTACAGGTGTCTCTAGTTTACCTGGTGGTAGTCACCCTTCTTTTGCTCGGGTCCGTGTAATTTCCGGTATTGATATTGAGCAAAAGGCAGTTGTTGTGGAAGATGACAAGATCCCTGGGGGAGAAAAGCTGTTAGAAACATTGCAGGGAACCGCATCAGTTGATGAAAATGCTTTTTTGGCAGCAGCTGAAGCTGTCAAAACAGCAATGTGCAACTTATTAATAAAAAAGCATTACCCTTCAGAGAGTAGAGAATCTAGGAAGAAAACCAGGAATGATAGAAAACTCAAGCAATAA 1296 0.4344 MEETEATEVAPALIAVHPHRSSVVVAVGYDLRVFDLLAGVGVTLLDDSSSSSSSSSSSHKDSIRAIRFSANGKLFVSAGDDKTLKIWSPISWRCIFTLSSEKRISAVAISNDESYVCFADKFGVVWVVDITGFDANQPLLYKKPTPLLSHYCSIITSLEFSPDDRFILSADRDFKIRVTNFPKKPLNGAHEIQSLSLALLSFKLRNASNTFFLAVVQLWDVSSGALLDTCEVANKAGLLESNGNGKSEEHGHAVTDLCTTLDGLLVAVAIQRQFNATFLKSFILYHCSLQGIALLSCNVSAQTLTLAKVVSFDGEAFVPTCLGYASSARELWIVTGVSSLPGGSHPSFARVRVISGIDIEQKAVVVEDDKIPGGEKLLETLQGTASVDENAFLAAAEAVKTAMCNLLIKKHYPSESRESRKKTRNDRKLKQ 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1923 431 PANTHER WD40 REPEAT PROTEIN 4 12 428 IPR028884 GO:0036265
Lal1g1923 431 SMART WD40_4 49 88 IPR001680 GO:0005515
Lal1g1923 431 SMART WD40_4 145 180 IPR001680 GO:0005515
Lal1g1923 431 SMART WD40_4 91 129 IPR001680 GO:0005515
Lal1g1923 431 Pfam WD domain, G-beta repeat 57 88 IPR001680 GO:0005515
Lal1g1923 431 Pfam WD domain, G-beta repeat 149 178 IPR001680 GO:0005515
Lal1g1923 431 ProSiteProfiles Trp-Asp (WD) repeats profile. 56 88 IPR001680 GO:0005515
Lal1g1923 431 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 56 88 - -
Lal1g1923 431 SUPERFAMILY WD40 repeat-like 14 268 IPR036322 GO:0005515
Lal1g1923 431 Gene3D - 5 278 IPR015943 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1923 K15443 - gmx:100786310 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1923 1 21436817 21440042 Lal1g1923 1 21436817 21440042 ECH