Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1916 ATGAGAATTAAAATGGGTTGGTTTTCAAAGATGTGCATAATTGTATTCATTTTCCTTGGTACCATAATATGTCATGGGCTTGCTCTCTCCATAAGTTTAAACGATGTGGAATGTGTATCAGAATATGTTGCAAATCAAGGTGACATTATTTCTGGTAATTTCATAGTCATGGATCATGATATTTTCTGGGGCTCTGACCATCCTGGAATTGATTTCTCTGTGACAGCACCAGATGGGACAATGGCTTATGCATTGAAGGGAGTATCAGGGGAGAAGTTTGAGTTGAAAGCATTACACTATGGAATATATAAGTTCTGCTTTCATAATCCTGTTTCCACTCCAGAGACTGTTTCTTTCTACATTCATGTTGGTCACATTCCAAACGAGCATGACTTAGCTAAAGATGAGCATTTGGACCCTATTAATGTGAAGATTGCTGAGTTGAGAGAAGCATTGGAGTCTGTAATATCAGAGCAAAAGTACTTGAAAGCACGTGATGCTAGACACCGATATACAAATGAAGGAACTAGAAAGCGTGTAGTGTTGTTCACAATGGGAGAGTATATTCTAATCGCTGCAACAAGTTTAATGCAAGTTGTATACATTCGTCGCCTCTTCAGCAAATCATTTGCTTACAATCGAGTCTAG 648 0.3827 MRIKMGWFSKMCIIVFIFLGTIICHGLALSISLNDVECVSEYVANQGDIISGNFIVMDHDIFWGSDHPGIDFSVTAPDGTMAYALKGVSGEKFELKALHYGIYKFCFHNPVSTPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVISEQKYLKARDARHRYTNEGTRKRVVLFTMGEYILIAATSLMQVVYIRRLFSKSFAYNRV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1916 215 SMART EMP24_GP25L_2 28 207 IPR009038 -
Lal1g1916 215 ProSiteProfiles GOLD domain profile. 36 123 IPR009038 -
Lal1g1916 215 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 8 211 IPR015720 -
Lal1g1916 215 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 49 132 IPR036598 -
Lal1g1916 215 Pfam emp24/gp25L/p24 family/GOLD 31 206 IPR009038 -
Lal1g1916 215 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 8 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1916 Lal-Chr1 21392874 21397586 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1916 K20347 - gmx:100789501 348.206