Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1908 ATGGCTATTGCTCTGAAATCAAGTTGCTTCTTGCAATTGAAGAAACCTGAGGTCAATTTCCTCAAAGGTTTTCCTTCCAATAAAACTATCATTTCAGTCAAAAGATACACTCCGTTGTGTGCCGCTATCAAAACAATGGAAACAGTTGGTCTCTCTGAAACATTCACCAGATTGAAAAAGGAAGGGAAAGTGGCTTTGATTCCATTCATCACAGCTGGTGATCCTGATCTTTCAACCACTGCAGAAGCACTGAAAGTGCTTGACTCTTGTGGTTCCGATATAATTGAGCTCGGTGTTCCATACTCTGATCCTTTGGCCGATGGTCCTGTTATCCAGGCTGCTGCCACACGTGCTTTGGCAAGGGGGACTAATTTTGATGCCGTTATTTCTATGTTAAAGGAGGTTGTTCCACAGTTATCTTGTCCAATTGCACTGTTTACATATTACAATGCCATACTGAAGCGCGGTACTGGGAGATTTATGTCCATCATAAGAGACAGTGGTGTACATGGGCTTGTTGTCCCAGATGTTCCTCTGGAGGAGACCGAGACTTTAAGGGAGGAAGCTAAGAAGCATGGAATTGAACTGGTGCTCCTGACCACACCTACCACTCCAACAAACCGGATGAAAGCCATTGTTGATGCTGCAGAAGGATTTGTGTATCTTGTGAGCTCAGTGGGGGTCACTGGAGCGCGAGCATCGGTTAGTGTCAAGGTTGAAGCTCTTTTGAAGGAAATTAAAGAGGCAACAAAAAAGCCTGTGGCAGTTGGTTTCGGAATATCAAAACCGGAGCATGTGAAACAGGTAGTAGCTTGGGGTGCTGATGGTGTGATTGTTGGAAGTGCTATTGTGAAGTTGCTTGGTGAGGCCAAAACTCCACAAGAAGGATTGAAGGAACTGGAAAACTTCACCCTCTCCTTAAAATCAGCACTTCCTTAA 939 0.4452 MAIALKSSCFLQLKKPEVNFLKGFPSNKTIISVKRYTPLCAAIKTMETVGLSETFTRLKKEGKVALIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALARGTNFDAVISMLKEVVPQLSCPIALFTYYNAILKRGTGRFMSIIRDSGVHGLVVPDVPLEETETLREEAKKHGIELVLLTTPTTPTNRMKAIVDAAEGFVYLVSSVGVTGARASVSVKVEALLKEIKEATKKPVAVGFGISKPEHVKQVVAWGADGVIVGSAIVKLLGEAKTPQEGLKELENFTLSLKSALP 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1908 312 Coils Coil 232 252 - -
Lal1g1908 312 TIGRFAM trpA: tryptophan synthase, alpha subunit 55 308 IPR002028 GO:0004834|GO:0006568
Lal1g1908 312 SUPERFAMILY Ribulose-phoshate binding barrel 51 291 IPR011060 -
Lal1g1908 312 Hamap Tryptophan synthase alpha chain [trpA]. 61 310 IPR002028 GO:0004834|GO:0006568
Lal1g1908 312 ProSitePatterns Tryptophan synthase alpha chain signature. 95 108 IPR018204 GO:0004834
Lal1g1908 312 Gene3D Aldolase class I 50 312 IPR013785 -
Lal1g1908 312 Pfam Tryptophan synthase alpha chain 55 309 IPR002028 GO:0004834|GO:0006568
Lal1g1908 312 PANTHER TRYPTOPHAN SYNTHASE ALPHA CHAIN 46 311 - -
Lal1g1908 312 CDD Tryptophan_synthase_alpha 65 308 IPR002028 GO:0004834|GO:0006568
Lal1g1908 312 PANTHER TRYPTOPHAN SYNTHASE, ALPHA CHAIN 46 311 IPR002028 GO:0004834|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1908 Lal-Chr1 21308114 21312485 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1908 K01695 - gmx:100808400 512.301