Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1895 ATGGCGAACCTTGAGAATCAAAAGCCATGGAAAGCAGAATATGCAAAATCTGGAAGATCATCGTGTAGAACTTGCAAGTCACCCATTGCCTCAGAAAACCTTCGTCTTGGAAAGATGGTTCAGTCCACCAAATTCGATGGCCTCATGCCTATGTGGCATCATGCTACTTGCATATTGAAGAAAGCCAACCAGATAAAAGAAACTGATGATGTTGAAAACTTGGAGTTGCTTCGTTGGGAAGATCAGCAGAAGATCAGAAAATACATAGAGGATGGTGGTGGCAGTAGTGCTCCATCAAAATCAAAAGCCACCAAAGATGGTGGTAGTGCTCCACCAAAATCAAATGCCACCAAAGATGCTGAATGTGGTATTGAAGTTTCTCAAACTTCTCGTGCTACTTGCAGGGATTGTGGCCAAAAAATTATCAAAGGAGAGGTTCGCATATCTATTAAGCCTGATGGTCAAGGTGCTAGAGGGTTAGCTTGGCACCATGCCAAGTGTCTCATGGAATTATCACCATCAATTCAAGTAGATAAGTTGTCTGGATGGGATAGTCTCTCTCCTTCTGATCAATCATCTGTCAGTGATTTGGCTAAGAAGGGTCCTGCTATGAAGAAGGGAGGTAGTAGTGCTACAAACGTTGAGGCCGAAGAGGTTAAAGAATCCACTTCCAAAGGTGGCATGAAACGTGGGAAGGATGCTGATGGTGGACAGAAATCAAAAGTTGCTAAAGCCAAGGGAGATGTAGCCGCGAGCAGGACAGCATCAGTGAAAAATGCTAATGATTCAGAGGAGGCACATGATTTGGAGAATAGGCTGGAGACCCAGAGCATAGAACTCTGGGCTCTGAAGGACGAACTTAAAAAGCATGTGACAAATGCAGAGATGCGTGAAATGCTGGAAGCCAATGATCAAGACTCAAGCGGATCAGAACTGGATTTGCGTGACCGCTGTGCTGATGGAATGATGTTTGGAGGACTTGGTCATTGCCCAATATGTGCTAGTTTTCTGCGTTATTCCGGAGGAATGTACCGGTGCACTGGATTCAGTTCTGAGTGGAGTAAGTGTTCCTACTCTACCACTGAACCAAAACGTCTTGAAGGGAAGTGGAAAATCCCTGTGGAAACAACCAACCAGTTTCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTCGGATATTGCCTCTTCAATCACCTAAGAAGCCCGTGGGTGGTCAAACTAGTGCTTCCCAGCATCAATCATCAAATAGTGAAAGTTTGAGGGATTTAAAAATTTCTATTTGTGGATTACCTAAAGACTCTATTGTGCAATGGAAACGCAAAATTGATGACATAGGCGGGGTGTTTCATGCGAAAGTTAAGAAAGATACTAACTGTTTGGTGGTCAGTGGAGCACTCGATGATGAAGCTGAGATGCGAAAAGCAAGGAGGATGAAAATACCAATAGTTCGAGAGGACTATTTGGTTGACTGTATAGAGAAAAAGAAGAAGCTTCCATTTGATATGTACAAAGTTGAAATGATTGGTGAGTCTTCTAGCATGGTCACCATCAAAGTGAAGGGACAAAGTGCTGTTCATGATGCTTCTGGACTAGCAGATTCCGGCCACATACTAGAGGAAGGGAAAAGCATATATAATACAACGTTGAATATGTCTGATTTATCTACTGGTGTTAATAGTTACTACGTTCTCCAAATTATCGAAGAAGATAAGGGATCAGATTGCTATGTGTTTCGTAAATGGGGTCGAGTGGGAAATGACAAGATTGGAGGAAGCAAGCTGGAAGCAATGCGGAAATCAGATGCAATCCATGAATTCAAACGGTTATTCTTTGAGAAGACTGCAAACCCTTGGGAGGCTTGGGAACAAAAGACTATTAAGAAGCAACCTGGAAGATTCTTCCCATTAGATATTGATTATGGGGTTAACAAGCAAGTCTCAAAGAAAAAGAATAATGATGAAGACTGCAAGCTACCCCCGCCGTTAATTGAGTTGATGAAAATGCTCTTCAATGTGGAAACATACAGAGCTGCCATGATGGAATTTGAGATCAATATGTCAGAAATGCCACTTGGGAAACTTAGCAAAAGTAACATCCAAAAGGGGTTTGAAGCATTAACAGATATACAGAATCTGTTAAAAACTGACAATCCCGATCCAGCAATGTTGGAAAGCTTGCTTATTGATGCCAGCAATCGGTTCTTCACAATGATCCCTTCTATTCATCCACATATTATTAGGGATGAGGATGATTTCAAGTCAAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCTTCAAGATTAGTTGGATTTGATGCCAATAATGATGACTCAATTGACGATAATTATAAGAAGCTCCACTGTGATATATCTCCACTTCCTCATGACAGTGAAGATTATCATTTAATAGAGAAGTTTCTCCTTAATACGCATGCTCCCACACATACGGAATGGAGTCTTGAGTTGGAAGAAGTTTTCGCACTTGAAAGGGAAGGGGAAATTGACAAGTTTGCTCCATACAGGGAAAAACTTGGTAACAGAATGCTCCTATGGCATGGTTCAAGGATGACAAATTTTGTGGGCATCCTTAGCCAAGGACTAAGAATTGCACCTCCTGAAGCTCCAGCTACTGGCTACATGTTCGGTAAAGGGGTTTACTTTGCTGACCTTGTGAGCAAGAGTGCTCAGTATTGCTTCACTGATAAGAAAAATCCTGTTGGCCTAATGCTTTTGAGTGAAGTTGCCCTTGGAAATGTCTATGAGCTCAAAAAAGCTAAGTATATGGATAAACCTCCCAGTGGAAAACACTCAACTAAAGGAATGGGCAAAAAAGTGCCTAATGAATCAGAATATGCAAAGTGGAAGGGTGATGTCACTGTTCCTTGTGGCAAACCAGTGCCATCAAGTGTCAAGGCTTCTGAGCTCATGTACAACGAGTACATTGTTTATAATACCGCTCAAGTTAAGATGCAATTCTTGTTGAAGGTGAGGTTCCATCACAAGAGATGA 3027 0.4172 MANLENQKPWKAEYAKSGRSSCRTCKSPIASENLRLGKMVQSTKFDGLMPMWHHATCILKKANQIKETDDVENLELLRWEDQQKIRKYIEDGGGSSAPSKSKATKDGGSAPPKSNATKDAECGIEVSQTSRATCRDCGQKIIKGEVRISIKPDGQGARGLAWHHAKCLMELSPSIQVDKLSGWDSLSPSDQSSVSDLAKKGPAMKKGGSSATNVEAEEVKESTSKGGMKRGKDADGGQKSKVAKAKGDVAASRTASVKNANDSEEAHDLENRLETQSIELWALKDELKKHVTNAEMREMLEANDQDSSGSELDLRDRCADGMMFGGLGHCPICASFLRYSGGMYRCTGFSSEWSKCSYSTTEPKRLEGKWKIPVETTNQFLKKWFKSQKGKKPVRILPLQSPKKPVGGQTSASQHQSSNSESLRDLKISICGLPKDSIVQWKRKIDDIGGVFHAKVKKDTNCLVVSGALDDEAEMRKARRMKIPIVREDYLVDCIEKKKKLPFDMYKVEMIGESSSMVTIKVKGQSAVHDASGLADSGHILEEGKSIYNTTLNMSDLSTGVNSYYVLQIIEEDKGSDCYVFRKWGRVGNDKIGGSKLEAMRKSDAIHEFKRLFFEKTANPWEAWEQKTIKKQPGRFFPLDIDYGVNKQVSKKKNNDEDCKLPPPLIELMKMLFNVETYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTDIQNLLKTDNPDPAMLESLLIDASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLHCDISPLPHDSEDYHLIEKFLLNTHAPTHTEWSLELEEVFALEREGEIDKFAPYREKLGNRMLLWHGSRMTNFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPSGKHSTKGMGKKVPNESEYAKWKGDVTVPCGKPVPSSVKASELMYNEYIVYNTAQVKMQFLLKVRFHHKR 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1895 1008 CDD WGR_PARP1_like 538 643 - -
Lal1g1895 1008 Pfam Poly(ADP-ribose) polymerase catalytic domain 803 1004 IPR012317 GO:0003950
Lal1g1895 1008 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 50 1002 - -
Lal1g1895 1008 Gene3D BRCT domain 413 516 IPR036420 -
Lal1g1895 1008 MobiDBLite consensus disorder prediction 218 242 - -
Lal1g1895 1008 SMART PADR1_2 314 367 IPR012982 -
Lal1g1895 1008 Gene3D - 326 386 IPR038650 -
Lal1g1895 1008 SUPERFAMILY BRCT domain 420 508 IPR036420 -
Lal1g1895 1008 Pfam PADR1 (NUC008) domain 316 365 IPR012982 -
Lal1g1895 1008 MobiDBLite consensus disorder prediction 396 421 - -
Lal1g1895 1008 MobiDBLite consensus disorder prediction 89 121 - -
Lal1g1895 1008 Gene3D - 2 111 IPR036957 GO:0003677|GO:0008270
Lal1g1895 1008 Gene3D - 113 221 IPR036957 GO:0003677|GO:0008270
Lal1g1895 1008 Gene3D - 793 1008 - -
Lal1g1895 1008 Coils Coil 259 286 - -
Lal1g1895 1008 SMART WGR_cls 548 631 IPR008893 -
Lal1g1895 1008 PANTHER DNA LIGASE 50 1002 - -
Lal1g1895 1008 SUPERFAMILY ADP-ribosylation 792 1007 - -
Lal1g1895 1008 SMART BRCT_7 420 498 IPR001357 -
Lal1g1895 1008 MobiDBLite consensus disorder prediction 182 268 - -
Lal1g1895 1008 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 125 196 IPR001510 GO:0003677|GO:0008270
Lal1g1895 1008 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 89 IPR001510 GO:0003677|GO:0008270
Lal1g1895 1008 SUPERFAMILY WGR domain-like 515 641 IPR036930 -
Lal1g1895 1008 ProSiteProfiles WGR domain profile. 537 636 IPR008893 -
Lal1g1895 1008 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 99 - -
Lal1g1895 1008 SMART zf_PARP_3 125 199 IPR001510 GO:0003677|GO:0008270
Lal1g1895 1008 SMART zf_PARP_3 13 90 IPR001510 GO:0003677|GO:0008270
Lal1g1895 1008 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 122 202 IPR001510 GO:0003677|GO:0008270
Lal1g1895 1008 MobiDBLite consensus disorder prediction 97 111 - -
Lal1g1895 1008 Pfam Poly(ADP-ribose) polymerase, regulatory domain 659 789 IPR004102 GO:0003950
Lal1g1895 1008 ProSiteProfiles PARP catalytic domain profile. 783 1008 IPR012317 GO:0003950
Lal1g1895 1008 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 658 793 IPR036616 GO:0003950
Lal1g1895 1008 Gene3D - 252 325 - -
Lal1g1895 1008 MobiDBLite consensus disorder prediction 182 196 - -
Lal1g1895 1008 CDD parp_like 659 1003 - -
Lal1g1895 1008 ProSiteProfiles BRCT domain profile. 418 508 IPR001357 -
Lal1g1895 1008 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 93 IPR001510 GO:0003677|GO:0008270
Lal1g1895 1008 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 123 206 - -
Lal1g1895 1008 MobiDBLite consensus disorder prediction 404 421 - -
Lal1g1895 1008 Pfam WGR domain 548 626 IPR008893 -
Lal1g1895 1008 ProSiteProfiles PARP alpha-helical domain profile. 658 776 IPR004102 GO:0003950
Lal1g1895 1008 Pfam BRCA1 C Terminus (BRCT) domain 423 495 IPR001357 -
Lal1g1895 1008 PIRSF NAD_ADPRT 3 1008 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Lal1g1895 1008 Gene3D - 648 792 IPR036616 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1895 Lal-Chr1 21204996 21213700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1895 K24070 - gmx:100815900 1671.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1895 1 21204996 21213700 Lal1g1895 1 21204996 21213700 ECH