Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1884 ATGGGTTCTCTCTCTCCTCCTTCATTCTCTAACAATATTTCTTCATCCCTTAATTCTAACCACATTGACGAAACTACCCTCGTCAACCTCTTCAAATCACAGCAAAACCACCTCAACTTCTTCTTCAACAACATCGACCACTCCCAAACCCTCTCCTTCACGCGCCTCCTCCTCTCCACCGCCGGAACTATCTTCTTCTCCGGCGTCGGCAAGTCCGGCTTCGTCGCCCGCAAGATCTCCCAAACCCTCGTCTCCCTCGCCATCCGCTCCGTCTTCCTATCCCCCGTCGACGCCCTCCACGGCGACATCGGCATCGTCTCCGACGGCGACGTCCTCGTTCTCCTCAGCAAGTCCGGCGCCACCGATGAGCTCCTCCGCCTTGTCCCCTGCGCTAGGGCCAAGGGAGCCCACCTAGTTGCGGTGGTTTCCGTCGAGGGATCGCCGTTGTCGACGATGTGCGATATGACGGTAGTTTTACCTCTTGAGAGGGAATTGTGTCCGTTTAATTTGGCGCCGGTGACGTCGACGGCGATTCAGATGGTGTTTGGGGACACGGTGGCGATAGCACTGATGGGAGCTAGGAATCTGAGCAAGGAAGAGTATGCAGGGAATCATCCAGCTGGCAAAATCGGAAAGAGTCTTATCTTTAAGGTAAAGGATGTCATGAAGAAGGAGGATGAGCTTCCCATTTGCAGGGAATCAGATTTGATTATGGATCAACTCGTGGAGCTGACGAGTAAAGGATGTGGATGCCTGCTTGTTGTAGATGACAATCACCATCTGATAGGAACATTTACGGATGGTGATCTACGTCGTACTCTCAAAGCAAGTGGTGATGCCATTTTCAAACTCACGGTGGGGGAAATGTGCAACAGGAAGCCGAGAATTATCGGTCCAGATGCTATGGCAGTGGAGGCAATGAAGAAGATGGAAGCACCTCCATCACCTGTACAGTTTTTGCCTGTGATAAATGATGACTGTACCTTGATTGGGATTGTTACATTGCATGGTTTGGTTTCAGCTGGATTATGA 1032 0.5136 MGSLSPPSFSNNISSSLNSNHIDETTLVNLFKSQQNHLNFFFNNIDHSQTLSFTRLLLSTAGTIFFSGVGKSGFVARKISQTLVSLAIRSVFLSPVDALHGDIGIVSDGDVLVLLSKSGATDELLRLVPCARAKGAHLVAVVSVEGSPLSTMCDMTVVLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMGARNLSKEEYAGNHPAGKIGKSLIFKVKDVMKKEDELPICRESDLIMDQLVELTSKGCGCLLVVDDNHHLIGTFTDGDLRRTLKASGDAIFKLTVGEMCNRKPRIIGPDAMAVEAMKKMEAPPSPVQFLPVINDDCTLIGIVTLHGLVSAGL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1884 343 ProSiteProfiles CBS domain profile. 222 281 IPR000644 -
Lal1g1884 343 CDD CBS_pair_SIS_assoc 214 339 - -
Lal1g1884 343 Gene3D - 21 212 - -
Lal1g1884 343 SUPERFAMILY SIS domain 29 342 IPR046348 GO:0097367|GO:1901135
Lal1g1884 343 CDD SIS_Kpsf 62 189 IPR035474 -
Lal1g1884 343 Pfam SIS domain 58 188 IPR001347 GO:0097367|GO:1901135
Lal1g1884 343 PIRSF KdsD_KpsF 11 343 IPR004800 GO:0005975|GO:0016853
Lal1g1884 343 Gene3D - 213 341 IPR046342 -
Lal1g1884 343 ProSiteProfiles CBS domain profile. 290 343 IPR000644 -
Lal1g1884 343 Pfam CBS domain 218 275 IPR000644 -
Lal1g1884 343 Pfam CBS domain 286 341 IPR000644 -
Lal1g1884 343 ProSiteProfiles SIS domain profile. 54 196 IPR001347 GO:0097367|GO:1901135
Lal1g1884 343 PANTHER - 1 343 - -
Lal1g1884 343 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 62 333 IPR004800 GO:0005975|GO:0016853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1884 K06041 - gmx:100805755 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1884 1 21128628 21131583 Lal1g1884 1 21128628 21131583 ECH