Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1880 ATGGAAGAGGGAGAGAGTTGTCATACACTGTTGAAAGGTGGTAGGAAAAGAGAGAAAGGTTATAGGCATGGTTTTTCAAGTAGTCAGATGCATGAAATGGCTTCTATATGTGACACCCTTTTGCCTTCCCTTCCATTGGACACTACCCTAAACAAGGACAACATAGAGGACCATGATGCCCTTCTTCAATTTTACACAATCTCTGGTTCTCAACCCCCATTTCCTGATGAGACTGCAGAGCTCTTGTTCAAGAGGGGTAGTCCAGAAGCATTGCTCGTGCTGAGCTGGGTTCTGTATATTATGTCCTTCAGATTAGGGACATTGTTGCTCTGTGGAACTATTTGCTTGGATTGGAACTGGCCTTTCATTCACAAGTTCTCTGAGATTTCATTGGACAAGAGAGAACAAATTCTCAAGAAATGGACAAGGGAAACAAAATTAATACCTCTGCACTTAGTCTTTGTGTTGATCAAACTTTTTTCCTTCTATAATTTTTTCTCAAGGGTTGATGATAAGGGGCATAATCCTGTATGGAAATCAATAGGGTACCGGGTGGACACCATGGAAAAATTGGCACGAGAGGAACGGCCTCTCCAGAAGGGAGTGGTAGAGACTATGTACGAAATTGATTCTACTTTAATTCAATCCCTTATTGAAAAAGGCCTTGAAGTCACTGAAGACATAGAGCAGAATATGTACAAGGTCAAATGTGATGTTGTCATCGTTGGTTCTGGTTGTGGTGGAGGAGTTGCAGCGGCAATTCTCGCAAACTCGGGTCAGAAGGTAATCGTCCTAGAGAAAGGAGAGTATTTTGTTCCAAATGATTATTCTTCACTCGAAGGCCCATCGATGAATGAGCTATATGAATCGGGTGGAATTATGCCGAGCGTTGATGGCAAGATTATGATTCTGGCTGGCTCAACCGTTGGTGGAGGCTCGGCTATAAACTGGTCTGCATGCATCAGAACCCCTGATTTTGTCCTTAAAGAATGGTCTGAAAAATATAAACTCCCTCTTTTTGCAAGCTCTACTTATCAATATGCCATGGACTCAGTATGCAAAAGGATCAGCGTGACAGAGAAATGCAAAAAGGAAAGCTTTCAGAACCAAATTCTTCGTAAAGGGTGTGAGGAAATCAGTTTAAAAGTTGAGTCAGTTGCAACAAATTCTTCAGAAGATCACTATTGTGGTTCATGCTGTTATGGTTGTAGAACAGGAGATAAAAAGGGAACTGACTCTACTTGGTTGGTTGATGCTGTGGAAAATGGTGCAGTGATCATCACCGGATGCAAAGCTGAGAAGTTCATATTGAAAGATGGAAAGAATGGACTAAAGACAAAGCAATGCTTAGGAGTGACTGCTTCAGCAACTTGGAGAAGTAAGGTAGCAAAGAAACTCCAAATCGAATCGAAAGTGACTATTTCGTCATGTGGCTCTCTTTGCACGCCGCCGCTAATGATTTCTAGTGGACTGCAAAATCCAAACATTGGAAGTAACCTACGTCTCCACCCTGCTCAATTTGCTTGGGGGTACTTCCCCGAAGACATGACAAACTTAAGCGGTAATATCTACGAAGGAGGGATCATAACTTCAATCCACAAGGCCTTTGCCGAGGATTCCACACCAAGATTCATTATAGAAGCACCTGCTTTAGGACCTGCATCGTTTTCCGCATTGCTTCCTTGGGTTTCAGGTCGTGACGCAAAAGATAGGTTGGTGAAGTACTCGAGAACCGCAAACCTTTTCGCATTGGTGAGAGATCAAGGATCGGGAAAAGTAAAGGGTGAAGGGAGAATTTCTTACAGACTTGGTCAAGTGGACAAAGAAAATCTAAGAGTTGGGTTAAGGAAGGCATTAACAATTTTGGTCGCGGCCGGAGCCGAAGAAGTCGGAACTTATAGAAGTGATGGACAAAGAATCAAATGTAGGGGGACGAAGGAGGAAGATTTGGAAGAGTTTCTTGACAAAGTCACAGTAGTTGGTGGTCCAAGGTCAAAGAGTGAACATTGGACAGTGTTTACAAGTGCACATCAAATGGCAAGTTGTAGAATGGGTTGCAATGAAGAACAAGGTGCAGTTGATGAAAATGGAGAGTGTTGGGAAGCAAAAGGGTTGTTTGTGTGTGATGGAAGTGTTTTACCTACTGCACTTGGTGTTAATCCTATGATAACTATTCAATCCACTGCATATTGTATTGCTACCAAAATTGCAGAATCATTCAAGAAACAAAAGCAGAACATTGATAATTAA 2250 0.4222 MEEGESCHTLLKGGRKREKGYRHGFSSSQMHEMASICDTLLPSLPLDTTLNKDNIEDHDALLQFYTISGSQPPFPDETAELLFKRGSPEALLVLSWVLYIMSFRLGTLLLCGTICLDWNWPFIHKFSEISLDKREQILKKWTRETKLIPLHLVFVLIKLFSFYNFFSRVDDKGHNPVWKSIGYRVDTMEKLAREERPLQKGVVETMYEIDSTLIQSLIEKGLEVTEDIEQNMYKVKCDVVIVGSGCGGGVAAAILANSGQKVIVLEKGEYFVPNDYSSLEGPSMNELYESGGIMPSVDGKIMILAGSTVGGGSAINWSACIRTPDFVLKEWSEKYKLPLFASSTYQYAMDSVCKRISVTEKCKKESFQNQILRKGCEEISLKVESVATNSSEDHYCGSCCYGCRTGDKKGTDSTWLVDAVENGAVIITGCKAEKFILKDGKNGLKTKQCLGVTASATWRSKVAKKLQIESKVTISSCGSLCTPPLMISSGLQNPNIGSNLRLHPAQFAWGYFPEDMTNLSGNIYEGGIITSIHKAFAEDSTPRFIIEAPALGPASFSALLPWVSGRDAKDRLVKYSRTANLFALVRDQGSGKVKGEGRISYRLGQVDKENLRVGLRKALTILVAAGAEEVGTYRSDGQRIKCRGTKEEDLEEFLDKVTVVGGPRSKSEHWTVFTSAHQMASCRMGCNEEQGAVDENGECWEAKGLFVCDGSVLPTALGVNPMITIQSTAYCIATKIAESFKKQKQNIDN 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1880 749 PIRSF Lg_Ch_AO 11 746 IPR012400 GO:0046577
Lal1g1880 749 Gene3D - 222 526 IPR036188 -
Lal1g1880 749 SUPERFAMILY FAD/NAD(P)-binding domain 236 741 IPR036188 -
Lal1g1880 749 MobiDBLite consensus disorder prediction 1 22 - -
Lal1g1880 749 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 5 745 - -
Lal1g1880 749 Gene3D - 665 748 IPR036188 -
Lal1g1880 749 Pfam GMC oxidoreductase 598 731 IPR007867 GO:0016614
Lal1g1880 749 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 5 745 - -
Lal1g1880 749 Pfam GMC oxidoreductase 238 505 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1880 Lal-Chr1 21095084 21099110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1880 8 745 Acyl Lipid Metabolism Gene Families AT4G28570 56.551 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1880 K17756 - gmx:100808951 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1880 1 21095084 21099110 Lal1g1880 1 21095084 21099110 ECH