Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1870 ATGGACTCAAAAGAAGAGGGTGAACATCATGAGGATAATCCCTCATCACCAATGTCAATCCTGCATCATTTATCTGAGGGGGCTTTTAAAGTTGCAGGGGAAGCATTGCAGAACATGTATTCTGGTGGTGATGGCGGCGGTGGTAGTGGTGGCAGTGGTGGTGGATCAAGTGCGACACAAATAAGGCCTTGTGTGCATAAACGCAGTCAAAGTGAAATAGTTACTAAAGGATTTCATCGTAGTAATAGTTTTCAGAAACTAAGAACTCATGTGAACCGGTGGCGGTGGGGTGGCAGCAAACACCGTGAAGAGGCAAATTTCAACCCTGAGATCTTGGCAAACCAGAAACGCCAGTGGTATCAGCTTCATCCCAAATCTCTGGATCGTGTAAATTATAAGGAGCCAACCTCGCTCTTTGAACATTTTGTGGTTGTGGGGCTGCATCCAGATTCTAATTTGGAAGCCGTGGAGGACGCATTCGCAAGAAGGAAGAAGTGGGAAAAAGATAAGGAAAAATATGATTATGTAGATTACAAAATGCTGCAGCGACAAAGGTTGCTGGCACCAATTTTGGAACCTCAGATACTTTTCAAATATCCTCCCGGGAAGAAGCTAACAGTGCGTATGAAGGATTTAGCCTCCTTCTGCTTTCCCGAAGGTGTTAAGGCCACGATGTTGGAGAGGTCTCCATCTCTAAGTGAACTAAATGAACTTGTCTATGGACAGGAGCATTTAGGCAGAGATGATCTATCATTTATCTTTACACTTAAGGCAGCAGACAATGCAACGCTTTATGGAGTTTGTTTACATGTGCCTGAAATTGTTCAGAGGCCACCTGGTATATTAGGCACATCATCTCCACATTCTCATCCATCTGGGATATGCAGCCGTTTTCTAGTTTCTGCACCTCGATGTTACTGTCTCCTGACTAGAGTTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTCATTGCACAGGAGCGTCTGAATCGGATAACTCAGTTTGTAAATGAGTTGACTCTCACCGGATCCATTCCAACAACACCGAAATTAGATGACCAAATGAGTTCAAATGCTAACTCCCCGGAAAGGGAGTCATTTAGTGACTGGATGTCTTGTGCAATACCTCTTGATGAGGCAGCAGCCATTACTGCTGCCGCTGCTGGGATTATTTCCGATGATGAAATCCCACAGTTATCGCCCAAAATATGGGACTCTCATTCTCAATCTCCTGCAAGTGTGACCGCCAGTGATGCTTCAGATTTTTTTCAGGTTAGGGATATAGACAAGGATGGTAGGAAGAATCTGCAAGATCATGATAATTGTGGTTTTGAGGCACCAGAATCTCATGATTCTATGGAAAGAGTGAATGGAAATTATGAAAACGACCAACTTTCTCCCCACGTTGGAACACCGTTATCTGCTCGGAGTCGTGTATTGGATCGTCTTGGAAGTTCCGAGTCACTTTTCAGTCCAGCTAGAAGCATGATCTCAGAAGACGAGGATGATCTTTTTGCAAACAATGAAACAGATTATGGGGATGAATTGTTGATGGAATGGGCTATGGAAAGTAAGAATGATTTGCTACAGTTAGTGTGTAGATATCATGCTTCACCTATTCCACCTCGAGGAAGTGAATATATCTTCCGCCCTCTTGAACATCTACAACCTATTCAGTATATCCGACATTCAGTTCCGTCTCTTGGCTTTAGTGAAAATTGTTTAATTTGTTCTGAACCTACTAAGGTCAATACGAAGTTAGCTGCTGCTGAGGAAGCCCTTGCATTATCAGTGTGGACAACCGCAGCTACTTGTCGAGTTCTGTCCCTTGAAAGTCTTCTGGCATTAGTTGCAGGAGTGTTGTTGGAAAAACAAGTCGTAGTAGTGTGCCCGAATCTGGGTGTTCTATCATCCACAGTGCTATCTCTTGTTCCCATGATTCGTCCATTTCAGTGGCAGAGTTTATTGCTTCCGGTTTTACCCGGGAAAATGATTGATTTTCTTGATGCACCAGTCCCATACATTGTTGGCATACAACATAAACCAGAACATTTAAATATGAAAACTAGTAATCTTGTTCTTGTTGATGTACTAAAGAATCAGGTCAAAATGTGTCACCTACCAAAACTTCCACAACATAGAGAGCTTGTTTCTCAATTGGGACCAATTCATGCTAGACTTGCATGTGAAAGTTCAATTGCTAGAAAGCATCCTGTACATAGGTGCAACGAAGTTCAGGCTGATGCTGCAACTCGGTTTTTGAATATCATGTGGCACTATTTGGAGTCACTTTGCTCAGAACTGAAATTCCATACAATAACTAGTGTACAATCAAATAATGACAGGGTTTCTTTACTTCTTAAAGATAGTTTCATTGATTCCTTTCCTAATAGGGACCAGCCATTCATTAAGCTATTTGTAGATACACAACTCTTCACAGTTTTATCAGATTCTCATCTATCAAGCTTTGAGAATGGAGAGTCATAG 2493 0.4216 MDSKEEGEHHEDNPSSPMSILHHLSEGAFKVAGEALQNMYSGGDGGGGSGGSGGGSSATQIRPCVHKRSQSEIVTKGFHRSNSFQKLRTHVNRWRWGGSKHREEANFNPEILANQKRQWYQLHPKSLDRVNYKEPTSLFEHFVVVGLHPDSNLEAVEDAFARRKKWEKDKEKYDYVDYKMLQRQRLLAPILEPQILFKYPPGKKLTVRMKDLASFCFPEGVKATMLERSPSLSELNELVYGQEHLGRDDLSFIFTLKAADNATLYGVCLHVPEIVQRPPGILGTSSPHSHPSGICSRFLVSAPRCYCLLTRVPFFELHFEMLNSLIAQERLNRITQFVNELTLTGSIPTTPKLDDQMSSNANSPERESFSDWMSCAIPLDEAAAITAAAAGIISDDEIPQLSPKIWDSHSQSPASVTASDASDFFQVRDIDKDGRKNLQDHDNCGFEAPESHDSMERVNGNYENDQLSPHVGTPLSARSRVLDRLGSSESLFSPARSMISEDEDDLFANNETDYGDELLMEWAMESKNDLLQLVCRYHASPIPPRGSEYIFRPLEHLQPIQYIRHSVPSLGFSENCLICSEPTKVNTKLAAAEEALALSVWTTAATCRVLSLESLLALVAGVLLEKQVVVVCPNLGVLSSTVLSLVPMIRPFQWQSLLLPVLPGKMIDFLDAPVPYIVGIQHKPEHLNMKTSNLVLVDVLKNQVKMCHLPKLPQHRELVSQLGPIHARLACESSIARKHPVHRCNEVQADAATRFLNIMWHYLESLCSELKFHTITSVQSNNDRVSLLLKDSFIDSFPNRDQPFIKLFVDTQLFTVLSDSHLSSFENGES 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1870 830 Gene3D - 128 350 - -
Lal1g1870 830 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 25 827 - -
Lal1g1870 830 MobiDBLite consensus disorder prediction 40 62 - -
Lal1g1870 830 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g1870 830 PANTHER BNAA09G10210D PROTEIN 25 827 - -
Lal1g1870 830 MobiDBLite consensus disorder prediction 1 16 - -
Lal1g1870 830 Gene3D - 600 764 IPR043153 -
Lal1g1870 830 SMART DENN_cls 301 702 IPR001194 -
Lal1g1870 830 ProSiteProfiles Tripartite DENN domain profile. 174 828 IPR037516 -
Lal1g1870 830 Pfam DENN (AEX-3) domain 599 700 IPR001194 -
Lal1g1870 830 Pfam uDENN domain 193 271 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1870 Lal-Chr1 20984860 20993685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1870 - - gmx:100814487 1295.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1870 1 20984860 20993685 Lal1g1870 1 20984860 20993685 ECH