Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1827 ATGGGATCAGTAGAAAGATCAAAGAAGAAAGCTCAGTTATGGAAGAAAGCTATGCTCCATTTTTCTCTTTGTTTTGTGATGGGATTCTTCACAGGATTAGCTCCAACAGGTAAATCTTCTTTCTTTACTAACAAAGTTGGTGTCTCAAATAGAACAACACAAGTTGCACCACAACCTAGTACTCAAATATTGTCACACCTCAAAACAAATGTTAATAATAAAAGTTGGGTAGATCCTAAAGCCTCATCAATACAAACAAGAACTACAAAAAAAATGGATATAGAATCATTGCCACAGTTGAAGCATAGAAGACTTGTAATCATTGTAACTCCAACAAGTACAAAACTTCCATTTCAAGCAGTGTTTTTGAGAAGGTTGGCAAATACTATAAAACTGGTTTCTCAACCATTGTTGTGGATTGTTGTGGAAGCAAAAACAGAATCTACAGAATTTCCAGAGATATTAAGAAAGACTGGGATCATGTATAGACATGTGGTTTTCACTGAAGAGTTCACTGATTTAGAAGCTGAGTTGAATCATCAGAGAAATCTTGCACTTAAGCACATTGAACATCATAGGCTGAATGGGATTGTACACTTTGCTGAGCTTTCAAATGTTTATGATCTTCAATTCTTCCAACAGCTTAGAGATATTGAGGTATTTGGGACTTGGCCAATGGCATTGTTAGCTGCAAACAGAAAGAAAGTAATAATAGAAGGACCAGTATGTGATTCATCACATGTTATTGGTTGGCATTTAAGGAATATGAACAATGAAACTGAAGCACTCACTCCTCCTATTCATATTTCAAGTTTTGCATTCAATAGTTCCATTCTCTGGGACCCTGAAAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATAAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAAGCTAAATTAAAGGGAATTCCATCAGAGGATTGCTCTAAAATCATGCTATGGCGTTTCAATTTTCGAACCCATATTTCAATTCACTAA 1017 0.3599 MGSVERSKKKAQLWKKAMLHFSLCFVMGFFTGLAPTGKSSFFTNKVGVSNRTTQVAPQPSTQILSHLKTNVNNKSWVDPKASSIQTRTTKKMDIESLPQLKHRRLVIIVTPTSTKLPFQAVFLRRLANTIKLVSQPLLWIVVEAKTESTEFPEILRKTGIMYRHVVFTEEFTDLEAELNHQRNLALKHIEHHRLNGIVHFAELSNVYDLQFFQQLRDIEVFGTWPMALLAANRKKVIIEGPVCDSSHVIGWHLRNMNNETEALTPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPSEDCSKIMLWRFNFRTHISIH 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1827 338 CDD GlcAT-I 104 331 IPR005027 GO:0015018|GO:0016020
Lal1g1827 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 104 337 IPR029044 -
Lal1g1827 338 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 335 - -
Lal1g1827 338 Pfam Glycosyltransferase family 43 126 330 IPR005027 GO:0015018|GO:0016020
Lal1g1827 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 104 334 IPR029044 -
Lal1g1827 338 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 335 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1827 Lal-Chr1 20601418 20604895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1827 1 336 Glycosyltransferase AT2G37090 61.538 2.52e-152 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1827 K20869 - gmx:100777749 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1827 1 20601418 20604895 Lal1g1827 1 20601418 20604895 ECH