Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1804 ATGGCTGCAACTCCATTCCTTATTCTTCAACCACGCTTCAACTCTTACATCAACCCTCTCTTTCGTTCACTCTCATCTTCACCTCTCTCATTCAATGCCACCTTTGCAATCCAATCCTCTCTCTCCTCTCCCTCCGAAACTCAATCTTCCTCCGCCGCCGGAAGGTCAGGCGCGTTATCTCCCGCTCCGCCTCTCTCCGGCGCCGTCCAGAAGATCGACGTGAATCCTCCCAAGGGAACGCGTGATTTCCCGCCAGAAGATATGCGATTGCGTAACTGGCTCTTCAATAATTTCAGAGAGGTTTCGCGGTTATATGGGTTTGAGGAGGTTGATTTTCCGGTGCTTGAAAATGAGGCATTGTTCACTAGGAAAGCAGGGGAGGAGATTAAGGATCAGCTTTATTGTTTTGAAGATCAGGGTAAACGTCGTGTCGCACTGAGGCCTGAGCTTACTCCTTCTCTGGCAAGGCTGGTGATACAGAAAGGGAAGTCTGTGTCACTGCCATTGAAGTGGTTCACTGTTGGGCAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGTCGTCGTGAGCACTATCAGTGGAATATGGACATCATTGGTGTTCCTGGGGTTATGGCTGAAGCAGAGCTTTTAGCTTCTATTGTCACATTGTTCAAGCGAATAGGAATTACAGAATCAGATGTTGGATTTAAGGTTTCCAGTCGAAAGGTTTTACAAGGAGTATTAAAGTGTTATTCCATACCTGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAGATTCCTGTTGATGAGATAAAGAAAGAGTTGAAGGTTGTTGGCTTGTCAGAAGAGGCTGTCCATGAGCTATTAGAAGTTCTTTCTGTAAAGTCATTGGCGGAGTTGGAAGAGAGAGTCGGGAGCTGTGGGGAAGCAATAGCTGATCTGAAACAACTATTCTTACTTGCTGAGAAGTTTGGCTACTCAAAATGGCTTCAATTTGATGCATCAGTTGTTCGTGGCCTTGCTTACTACACTGGCATTGTATTTGAGGGTTTTGACCGAGAAGGAAAACTGCGAGCTATCTGTGGTGGTGGCCGATATGATCATTTGTTCTCAACTTTTGGTGCTGATGACATTGCTGCCTGTGGTTTTGGATTTGGTGATGCAGTCATAGTGGAATTGCTCAAAGAGAAGGGTCTGCTACCAGAGCTCAGCTTACAAGTACATAACATCGTCTGTGCATTGGATGAAGATCTTCAAGCTGTTGCTGCTACGGTTGCTAATGTTCTTAGAGAAAAGGGACAGAGTGTTGACTTGGTTTTGGAAAGCAAACCTCTTAAATGGGTTTTTAAACGGGCAGCCCGAACAAATGTGGAACGGTTGGTTATAGTGGGGAGTTCTGAGTGGCAAAGGGGTATGGTTGGTGTCAAAATTCTGTCTACTGGTGAACAGTACGAGGTTAAACTGGATGATCTAAAATGA 1476 0.4526 MAATPFLILQPRFNSYINPLFRSLSSSPLSFNATFAIQSSLSSPSETQSSSAAGRSGALSPAPPLSGAVQKIDVNPPKGTRDFPPEDMRLRNWLFNNFREVSRLYGFEEVDFPVLENEALFTRKAGEEIKDQLYCFEDQGKRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELLASIVTLFKRIGITESDVGFKVSSRKVLQGVLKCYSIPENLFGKVCVIIDKIEKIPVDEIKKELKVVGLSEEAVHELLEVLSVKSLAELEERVGSCGEAIADLKQLFLLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIAACGFGFGDAVIVELLKEKGLLPELSLQVHNIVCALDEDLQAVAATVANVLREKGQSVDLVLESKPLKWVFKRAARTNVERLVIVGSSEWQRGMVGVKILSTGEQYEVKLDDLK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1804 491 PIRSF His-tRNA_synth 70 491 IPR004516 GO:0005737
Lal1g1804 491 MobiDBLite consensus disorder prediction 43 83 - -
Lal1g1804 491 TIGRFAM hisS: histidine--tRNA ligase 76 486 IPR015807 GO:0004821|GO:0005524|GO:0006427
Lal1g1804 491 PANTHER HISTIDYL-TRNA SYNTHETASE 70 491 IPR004516 GO:0005737
Lal1g1804 491 SUPERFAMILY Class II aaRS ABD-related 409 490 - -
Lal1g1804 491 SUPERFAMILY Class II aaRS and biotin synthetases 76 397 IPR045864 -
Lal1g1804 491 CDD HisRS-like_core 87 394 IPR041715 -
Lal1g1804 491 Pfam Anticodon binding domain 410 490 IPR004154 -
Lal1g1804 491 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 70 491 - -
Lal1g1804 491 Hamap Histidine--tRNA ligase [hisS]. 72 491 IPR015807 GO:0004821|GO:0005524|GO:0006427
Lal1g1804 491 Pfam Histidyl-tRNA synthetase 79 383 IPR041715 -
Lal1g1804 491 Gene3D - 399 491 IPR036621 -
Lal1g1804 491 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 79 400 IPR006195 -
Lal1g1804 491 Gene3D Bira Bifunctional Protein; Domain 2 70 397 IPR045864 -
Lal1g1804 491 Coils Coil 296 316 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1804 K01892 - gmx:100793186 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1804 1 20378055 20389854 Lal1g1804 1 20378055 20389854 ECH