Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1793 ATGGCCCCGGGTCATATTCTTCCTATGGTAGATATGGCCAAATTATTATCAAGGCGCAATGTTAAGGTAACAATAGTAACTACACCTCTTAATTCTATTCAATTTCAAGAGTCTATAGATAGAGAAATCCAAAATGGTTCACCTATCCAAATTCAACTATTTCAATTTCCAAATGATGAAGCTGGAATACCAAAAGGGTGTGAAAGTGTTGATACTTTACCTTCAATGGATTTAATACCAAACTTTCCTATTGCTTTAGACATGTTGCATAAGCCATTAGAGAAGCTATGTGAAAACCTAACACCTTTTCCAAGTTGCATAATATGTGATAAACATATTCCATGTGTAGCTGAAATTGCCAACAAGTTCAAAGTTCCAAGAATAATATTTGATGGTACTAATTGTTTTAATCTCTTATGTACCCATAATTTGCATGTTTCTAAGGTTCATGAAGGTGTTTCTAGTGAAGAGAAATTTGTTGTCCCTGGTTTGCCACATAGAATAGAGTTACAAAAATCTCAACTTCCTGGGTTATTAAACCCTAGCACAGATCAAAAGATGAATGCATTTCGTGAGAAAATTAGGGCATGTGAAGAAAATTCTTATGGAATTGTAGTTAATAGTTTTGAAGAGTTGGAAGTAGAATATGTTAAAGAATACCAAAGGGTAACTGGTCGTAAGGTATGGTGTCTAGGACCTGTGTCCTTAACAAATAAGGACGTTTTGGACAAAGCACAAAGAGGTAAAAGAAAAAATACAAATGATGAAAGCCAATATATGAAGTGGCTTGATTCATGGCCTATAGGGTCAGTTATATATGTTTGTTTAGGTAGTTTAAATAATGCAACACCTGAACAATTGATAGAGATTGGTTTAGGGTTAGAAGCAACAAAAAGACCCTTCATTTGGGTCATTAGAGGTGCATATAAAAGAGATGAAATAGAAACTTGGCTAGTTGATTATGGTTTTGAAGATAGGGTTAAAGGTAGAGGAATTTTGATTAAAGGTTGGGCCCCACAAGTGTTGATATTATCACATAAATCAATAGGGACATTTTTGACACATTGTGGATGGAATTCAACACTAGAAGGGATTTGTGCTGGGGTACCCTTAGTGACATATCCTCTATTTGCTGAACAATTTTTTAATGAGAAAGTTGTGGTGCAAGTTTTGAAGAGTGGTGTGAGTTTGGGAGCTGAAAATGGTGTGCATTTGGGTGAGGAAGAGAAATCAAGTGTTCAAGTCAAGAGGGAAAATGTTAGAGATGCTATAGAGAAGGTTATGGGTGAAGGTGAAGAACAAGAAAGAATAAGAGACATAGCTACAAAGTGGGCATACATGGCAAATAAAGCTATAGAAGAAGGTGGATCTTCTTACAATAATATGTCACAACTTATCGAAGACATAATACATCTCGGATAA 1422 0.353 MAPGHILPMVDMAKLLSRRNVKVTIVTTPLNSIQFQESIDREIQNGSPIQIQLFQFPNDEAGIPKGCESVDTLPSMDLIPNFPIALDMLHKPLEKLCENLTPFPSCIICDKHIPCVAEIANKFKVPRIIFDGTNCFNLLCTHNLHVSKVHEGVSSEEKFVVPGLPHRIELQKSQLPGLLNPSTDQKMNAFREKIRACEENSYGIVVNSFEELEVEYVKEYQRVTGRKVWCLGPVSLTNKDVLDKAQRGKRKNTNDESQYMKWLDSWPIGSVIYVCLGSLNNATPEQLIEIGLGLEATKRPFIWVIRGAYKRDEIETWLVDYGFEDRVKGRGILIKGWAPQVLILSHKSIGTFLTHCGWNSTLEGICAGVPLVTYPLFAEQFFNEKVVVQVLKSGVSLGAENGVHLGEEEKSSVQVKRENVRDAIEKVMGEGEEQERIRDIATKWAYMANKAIEEGGSSYNNMSQLIEDIIHLG 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1793 473 Gene3D Glycogen Phosphorylase B; 249 450 - -
Lal1g1793 473 PANTHER GLYCOSYLTRANSFERASE 1 471 - -
Lal1g1793 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 471 - -
Lal1g1793 473 PANTHER GLYCOSYLTRANSFERASE 1 471 - -
Lal1g1793 473 CDD GT1_Gtf-like 1 458 IPR002213 GO:0008194
Lal1g1793 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 270 389 IPR002213 GO:0008194
Lal1g1793 473 Gene3D Glycogen Phosphorylase B; 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1793 Lal-Chr1 20257110 20258531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1793 1 471 Glycosyltransferase AT2G36770 49.053 1.51e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1793 K13496 - gmx:100820150 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1793 1 20257110 20258531 Lal1g1793 1 20257110 20258531 ECH