Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1792 ATGGCTTGTTCCAAAACAATGCAGCTTCACTTTCTTCTTGTTCCCTTAATGTCCCAAAGCCATCTCATACCCTTCACAGATATGGCTAAGTTACTTGCATCCCAAGGCACAGAAGTTACCATTGTTCTTACACCTCTTAATGCTGCTAGGTTCAACATCTTCATTGATGAAGCAAAAGCCTCAAACCTCAAAATCAAATTTCACTTAATACCCTTTCCTTGTTTACAAGCAGGGTTGCCAGAAGGGTGTGAAAACATAGACACTCTTCCATCACTTGAATACCAACCAAGGTTTTTTGCTGCTAGTAACATGCTTAAAGAGCCACTTGAGAAATGGTTATCACAAATTGAAACACTACCTAGTTGCATCATTTCTGATATATGTCTTCCTTGGACAGCAAGTATTGCATCAAAGTTTAACATTCCAAGGGTTATATTCCATATAGTCTCTTGTTTCACCCTCTTGTGCTCACATAATATTGCAATCTCTAAGGTTCATGAGAGTGTTACATCAATGACTAAGACTTTTGTTGTGCCTGATTTGCCTGATAGAATTGAATTCACCAAATCACAGCTACCTGAAGCAATGAGATCACAAGATTCAAAGGCTTGGAAAGATACTATTGATCAATTCAAAGCATCTGAAGTTTTAGCACAAGGGATATTGGTTAATAGTTTTGAGGAGTTAGAGATGTTGTATGTGAAAGGGTATGAGAAAGTGGTTCAAAAAGTTTGGTGTATAGGACCACTTTCCTTGCATGATAACAATAATAATAAGGGCTCTATATATGATGATGAGTCTGCATGTTTCAATTTTCTTACATCAAAGAAGCCTTGTTCTGTCATCTACGTGTGTTTCGGCAGCTTATCGCGCCAATCGGTTTCACAATTGAAGGAGCTTGCTTTGGGTTTGGAAGCATCAAACCATGCATTTATTTGGGTGATTGGAAAAAAAGATTTTTCTGAAGAGTTAGAGAAATGGCTAGCTGAGGAGAAATATGAAGAGAGGAACAAAGAAAAAGGTGTCATAATTAGAGGATGGGCACCACAAATTAAGATACTATCACATCCTTCTATTGGTGCCTTCTTAACTCACTGTGGTTGGAATTCTACACTTGAAGCTGTTGCTGCAGGTGTGCCAATGATAACTTGGCCTATGTTTGCTGAACAATTCTATAATGAGAAGTTCATTGTGCAAGTTTTGAACATTGGTGTAAGGGTTGGTGTTGAAGTTGTTGTTCTTGATAACATGGATGAAAAGAAAGTGTTGGTGAAGAAAGAGGATTTGAAGAATTCTATTGATAATATTATGGAACAAGGTGAAGAAGGGGAACAGAGAAGGAAGAGGGCTAAAGAGCTAAAAGAAATGGCTCATAAGGCAGTTGAAGAAAGTGGATCTTCAACTACTAATTGCAACTTGTTCATTCAGCAAATTATGGGTCAAATTCATATTTAA 1455 0.3759 MACSKTMQLHFLLVPLMSQSHLIPFTDMAKLLASQGTEVTIVLTPLNAARFNIFIDEAKASNLKIKFHLIPFPCLQAGLPEGCENIDTLPSLEYQPRFFAASNMLKEPLEKWLSQIETLPSCIISDICLPWTASIASKFNIPRVIFHIVSCFTLLCSHNIAISKVHESVTSMTKTFVVPDLPDRIEFTKSQLPEAMRSQDSKAWKDTIDQFKASEVLAQGILVNSFEELEMLYVKGYEKVVQKVWCIGPLSLHDNNNNKGSIYDDESACFNFLTSKKPCSVIYVCFGSLSRQSVSQLKELALGLEASNHAFIWVIGKKDFSEELEKWLAEEKYEERNKEKGVIIRGWAPQIKILSHPSIGAFLTHCGWNSTLEAVAAGVPMITWPMFAEQFYNEKFIVQVLNIGVRVGVEVVVLDNMDEKKVLVKKEDLKNSIDNIMEQGEEGEQRRKRAKELKEMAHKAVEESGSSTTNCNLFIQQIMGQIHI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1792 484 Gene3D Glycogen Phosphorylase B; 7 270 - -
Lal1g1792 484 CDD GT1_Gtf-like 9 463 IPR002213 GO:0008194
Lal1g1792 484 Gene3D Glycogen Phosphorylase B; 271 462 - -
Lal1g1792 484 PANTHER GLYCOSYLTRANSFERASE 5 480 - -
Lal1g1792 484 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 234 400 IPR002213 GO:0008194
Lal1g1792 484 Coils Coil 426 446 - -
Lal1g1792 484 ProSitePatterns UDP-glycosyltransferases signature. 347 390 IPR035595 -
Lal1g1792 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 479 - -
Lal1g1792 484 PANTHER GLYCOSYLTRANSFERASE 5 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1792 Lal-Chr1 20253872 20255326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1792 1 479 Glycosyltransferase AT2G36780 47.870 2.69e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1792 K13496 - gmx:100777956 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1792 1 20253872 20255326 Lal1g1792 1 20253872 20255326 ECH