Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1758 ATGCTTCTTCTTTGCAACCCTTCTTCTCTTTCTATGCAATCAAGAATCACAGTTTCGTTTCCACCAAAACCCAATAACCACTCTTCGATTTTCACCATCTCTGCTTCTTCTTCTTCTTCTTCCAGCAACAGAACAAAAACCATTTCTGCTTCTGAAGCCAGAATTTCACTCATTTTTGCTCTTGCGTCTCAAGCTTCCTCTCTCTCCTTGCGACTTGTAGCTGATTTGGCTAATGAGACTGCAAAATATTTGTTTCCCAAGAGATTTGAAAGCCAAAGTCTTGAGGAGGCGTTGATGGCAGTTCCTGACCTTGAGACTGTGAAGTTTAAAGTTCTGAGCAGAAAGCAACAGTATGAGATCAGGGAAGTTGAGCCTTACTTTATAGCAGAGACTACAATGCCTGGGAAGAGTGGGTTTGATTTCAATGGTTCTTCTCAATCCTTTAATGCCCTAGCTGAGTACCTTTTTGGTAAGAATACAACGAAGGAGAAAATGGAAATGACTACACCAGTTTTTACAAGTAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCCGTGTTAACAACGAAGAAGGAAGGTCAAGATAAGTGGACAATGTCTTTTTTAATGCCATCAAAATATGGTGCTAACTTGCCACTGCCTAAAGACTCTTCTGTGAGGATCAAAGAGATTCCCGGAAAAATAGTTGCTGTTGTTTCCTTTTCAGGATTTGTAAATGATGAAGAAGTTAAGCAGCGGGAACTGAAACTACGAGAAGCTTTGAAAAGTGACAAACAGTTTAAAATCAAAGATGAAACTTCAGTAGAAGTTGCACAGTATAATCCACCGTTTACTCTTCCATTTCAACGCCGTAATGAGATCGCATTGGAGGTAGAGCGGAAAAATGAGTAG 900 0.3989 MLLLCNPSSLSMQSRITVSFPPKPNNHSSIFTISASSSSSSSNRTKTISASEARISLIFALASQASSLSLRLVADLANETAKYLFPKRFESQSLEEALMAVPDLETVKFKVLSRKQQYEIREVEPYFIAETTMPGKSGFDFNGSSQSFNALAEYLFGKNTTKEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKKEGQDKWTMSFLMPSKYGANLPLPKDSSVRIKEIPGKIVAVVSFSGFVNDEEVKQRELKLREALKSDKQFKIKDETSVEVAQYNPPFTLPFQRRNEIALEVERKNE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1758 299 Pfam SOUL heme-binding protein 175 292 IPR006917 -
Lal1g1758 299 Pfam SOUL heme-binding protein 104 173 IPR006917 -
Lal1g1758 299 Gene3D Regulatory factor, effector binding domain 103 177 IPR011256 -
Lal1g1758 299 Gene3D Regulatory factor, effector binding domain 178 299 IPR011256 -
Lal1g1758 299 PANTHER OS02G0533200 PROTEIN 35 299 - -
Lal1g1758 299 PANTHER HEME-BINDING PROTEIN-RELATED 35 299 IPR006917 -
Lal1g1758 299 SUPERFAMILY Probable bacterial effector-binding domain 175 294 IPR011256 -
Lal1g1758 299 SUPERFAMILY Probable bacterial effector-binding domain 99 174 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1758 Lal-Chr1 19931792 19940028 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1758 - - gmx:100797412 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1758 1 19931792 19940028 Lal1g1758 1 19931792 19940028 ECH