Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1756 ATGGGTTGTGTCTCTTCAAAACACGTCAAAAAGGAACTCAAACAAAAACAACAACTCACTTTCAACAATGGTGCTTTGAACCACGTGGTTTCTCTAACTTCCTCAACCTATGGAGCACTCAACTTAGATAATGACCAAAAACCCATTGCCATAGACACAACAACAACAACAACAACAACAACCATTGAAGAATCGAAGAGTTTTGTTGTTGTTCATAAATCTTCACCAGTTCACGAAGACCCAGAAATCATCAATGCTTGGGAACTCATGGAGGGTATTGAAGAAGGAGTACCCATTTCAATTCAACTCAAGAAAAGCCCAAAGTTGAGTCCTTTTCTTCGTGGGTTTATCAATACCCCTGACACAAAATCAAGCCCCTTGAAATTCTTCTATCAAAATGGGTCTCCAAAGAGTATGAGAAAATCTTCAGGTAAAGAGAACAAGAACAAGGTTCAAGTTAATGGAAGCAAAAGAATGAGACGTTTGGATTATAATTATAGTCCTAAAGGGGTTTTGAAAGAGATTAATTCTTGTCCAAGCACATGTAAATCAGTGTTGAATTTGAATCCATTGAAATTGTCTCCAAGGAACAGTTTTGGAAGTGGTTCATTGAGAAAAATGAGTCATAGTCCATTGTTTGATCCAGATCTTGCTGCATCACATGAAAAGGAACCGGTTATAGTTGAAGAAGAACAAATCAAGAAAATGGTTTATGCTACACCAAAAGCAGCAAGAAGAGTAAGAAAATCTATTGATTCAGAAACTTTTCTTCAGAAGTTTGAGATGAAGTGTCCTAAGGGAGGGGAAAATTGTGTTGTGATCTACACTACCACATTGAGAGGAATAAGAAAGACATTTGAAGATTGCAATAAGGTTCGAGCAATTGTTGAATCATGCAATGTACACATGGTTGAACGTGATGTATCCATGCATTCAGGGTTCAAAGAAGAGTTGAGGAAGCTAATAGGAACTAAAGAAGTGAAGGTTCCTGTTGTTTTTGTAAAAGGAAGGTTTATTGGAGGAGTTGATGAAACTTTGAAGTTGGAAGAAGATGAGAAATTAGGCGTTCTATTTGAAGGGATACCAAAGGCATTATTAAGTGGTTGTGAAGGGTGTGGTGGTGTGAGGAGCATTGCATCTTATAGATACTCAAATCATGAGAAAAAGTATAAACTATAA 1179 0.3707 MGCVSSKHVKKELKQKQQLTFNNGALNHVVSLTSSTYGALNLDNDQKPIAIDTTTTTTTTTIEESKSFVVVHKSSPVHEDPEIINAWELMEGIEEGVPISIQLKKSPKLSPFLRGFINTPDTKSSPLKFFYQNGSPKSMRKSSGKENKNKVQVNGSKRMRRLDYNYSPKGVLKEINSCPSTCKSVLNLNPLKLSPRNSFGSGSLRKMSHSPLFDPDLAASHEKEPVIVEEEQIKKMVYATPKAARRVRKSIDSETFLQKFEMKCPKGGENCVVIYTTTLRGIRKTFEDCNKVRAIVESCNVHMVERDVSMHSGFKEELRKLIGTKEVKVPVVFVKGRFIGGVDETLKLEEDEKLGVLFEGIPKALLSGCEGCGGVRSIASYRYSNHEKKYKL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1756 392 SUPERFAMILY Thioredoxin-like 266 358 IPR036249 -
Lal1g1756 392 Pfam Glutaredoxin 272 339 IPR002109 -
Lal1g1756 392 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 377 - -
Lal1g1756 392 ProSiteProfiles Glutaredoxin domain profile. 260 365 - -
Lal1g1756 392 PANTHER EMB|CAB85507.1 1 377 - -
Lal1g1756 392 Gene3D Glutaredoxin 266 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1756 Lal-Chr1 19919182 19920846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1756 K17479 - gmx:121174128 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1756 1 19919182 19920846 Lal1g1756 1 19919182 19920846 ECH
Lal11g1240 11 16147727 16149134 Lal1g1756 1 19919182 19920846 LSH