LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal1g1752	ATGTCTAGTCGACAAGAGAAAGGTGTTAACGTTCAGGTCCTTCTTCGTTGCAGGCCATTTAGTGAAGATGAGTTGCGAAGCAATGCACCACAAGTTGTGACTTGCAATGAGTTTAATAGAGAAGTTGCAGTTTCTCAGAACATTGCCGGAAAGCATATAGATAGGGTTTTCACTTTTGATAAGGTTTTTGGCCCTTCTGCACAGCAAAAGGATCTTTATGAACAAGCTGTTACTCCTATTGTTAACGAAGTTCTAGAGGGCTTTAATTGTACCATATTTGCGTATGGTCAAACTGGCACGGGAAAAACATACACTATGGAAGGTGAATGCAAAAGGTCAAAGAGTGGGCCCAATAGAGAGTTGCCTCAAGAAGCTGGAGTCATTCCAAGGGCTGTTAAGCAGATTTTTGATATGCTTGAGAGCCAGAATGACGAATATAGTGTAAAAGTCACGTTTTTAGAATTGTACAATGAAGAAATCACTGATTTGCTTGCCCCAGAGGAGCTTTCTAAAGTTTCTTTGGAGGAGAAGCAGAAAAAGCAGCTACCTCTTATGGAGGATGGTAAAGGTGGAGTTCTTGTAAGAGGTTTGGAGGAGGAAATTGTTTCAAGTGCTAGTGAGATTTTTACTCTTTTGGAGAGGGGGTCTTCCAAAAGACGTACTGCTGAAACTTTGTTAAACAAGCAGTCAAGTCGATCACATTCTTTGTTTTCCATTACAATCCACATCAAGGAAGCAAACCCTGAAGGCGAAGAACTAATAAAATGTGGTAAGCTGAATTTGGTTGATCTAGCTGGATCAGAAAATATATCTCGTTCTGGGGCTAGGGAGAATCGTGCAAGAGAAGCTGGAGAAATCAATAAAAGTTTACTTACTTTAGGGCGGGTCATCAGTGCACTTGTGGAGCACCTTGGTCATATTCCTTACAGGGATAGTAAATTGACACGTTTATTGCGTGATTCGCTTGGGGGAAGAACCAAGACATGCATCATAGCTACAGTCTCTCCTGCTGTTCATTGCTTAGAGGAAACATTGAGCACACTGGATTATGCACACAGGGCAAAGAACATTAGAAATAAGCCTGAGGTTAACCAAAAAATGATGAAGTCAACTCTTATCAAGGATCTTTATGGTGAAATCGAACGCCTTAAGGCTGAGGTTTATGCTACACGTGAGAAAAATGGAGTCTATATACCTAAGGAAAGATACTATCACGAGGAGAGTGAGAGAAAGGCTATGGCAGATCAGATTGAGCAGATGGGGGTCACAATTGAAACTCAACAGAAGCAACAAGAGGATTTGCAGAGCAAATACATTTACCAAGTCCAACTATGCTCTGATTTGAGCAACAAACTTAATACCACTGAGAAAACCTTGAACAAGACCAGCAGGTTGCTTGCCAACTCAGAGGAAGAAGTCAAAAAATGTCAATATACATTGAAAGAGAAAGATTTCATCATTTCTGAGCAGAGAAAAGCAGAAAATGCTCTGGCTCATCAAGCTTGTGTTTTACGAGCTGATTTGGAGAAAGCTCATGATGATAATGCTTCACTGTTTTTGAAAATTGGTAGAAAAGACAAATTGAATTCAGATAACCGAACTGTGGTGAACAATTTTGAAGTGGAGTTTGCCCAACAGGTTGGTGCTCTCCGCAACACTGTGTCGCTATCATTGTCTGAACAGAATGAACACCTGCAATGTGTGGAGAAGCTTTGTTATTCATTTTTGGGAATAAATGATAAGACGGTTATTGATTTGAAAAAGAAGGTGACAGCTCTGAAGGAGTTGTATATATCTCACAACGAGGCAATGCAAAATGTTGTGCGTTTGCATAAGGCAGGCTCTGATGCTACTCTGAATGAATTATCATCTATTATATCCTCCAATGGTCATTCTATTGAAGAATTTCTTGCATCTGAAAGCGTTGAATCTGATTCAATATTTGATGATCTTCAAAATTCTCTTTCAACCCAACAGGGTGAATTAGCTCTTTTTGCAAGGGAACTGCGAAATAGATTGAATCTCAGTGTTAAACAAATAAAGGATATATCTGAGCGGTCTCAAGAACTTGTGGATAGGCTTTTTGAAGAATCGAAAAAGCTTGAAGACTTTGCATTATCAGCTGATTATATGCAAATGAAGAACATTGGAGATTTTAAGCAAGCTTATGAGGAGCAGTCAAGATCTGATGCAGAGAAACTTATTGTGGATATGACTAGTTTAGTTACTGACCACATTCGTCGCCAAATGGATCTGGTTGATGCAAAGCTTATTGATCTTAGAGAAAGTGGCATTACGAACAAGGCATTCTTTGATGGACATGTGGAATCACTTGGAGACATAGTGAACCATGCAAAAAGAAAATGGCAGACCTTTTGCGTGCAAGCTGAAAAAGATACCAAAGACACTGCTGATTATTCCGCAGCCAAGCATTGTCGTATGGAGGAACTCCTGCAGCAGAGTGTTAATACGGCTGAATCAGTTTCGTTGCATACAAAGAGTACACTTGAGGCAGTAAATAAGATGGGGGCCAAACATATTTCTGCTGCAGTGTCACTTGTCAGGAATGCTTGTGATAACAATATGCAACATGACAATGAGATCAATTCTGCACGACTCACAGCCGAGGAAGCTGTAGTGAAGAACAGTGGCGATCTTATAGAGCAGTTTGATGTTATGTCTGCACAAGAGCAGGAGTGCATTACTGGCGTGGTGGATATGGCGAAAATTCATGCAAATACACTTGAGGCGCTCAGAGAGGATCATTCTAGCCAAACTGCTTCGATTGAACACAAGTCGCGCGAAACTTTTCAGCAATTCTATAGGGACTATGAGCCTAGTGGTACTACACCATTAAAGTGTGACCCTGATGTTCCAAGTAAAGGTACCATTGATTCTCTTAGATCCTTGCCAATGGAACAACTTGTTGAGGAATTTCGGGAAAATAATTCATATGAATCTTCTAATGAAAAGGAGATGAAACCTTCCCTTATTCCACGTTCTCCCTTCAGCCAATTGAACTAA	3024	0.4034	MSSRQEKGVNVQVLLRCRPFSEDELRSNAPQVVTCNEFNREVAVSQNIAGKHIDRVFTFDKVFGPSAQQKDLYEQAVTPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRSKSGPNRELPQEAGVIPRAVKQIFDMLESQNDEYSVKVTFLELYNEEITDLLAPEELSKVSLEEKQKKQLPLMEDGKGGVLVRGLEEEIVSSASEIFTLLERGSSKRRTAETLLNKQSSRSHSLFSITIHIKEANPEGEELIKCGKLNLVDLAGSENISRSGARENRAREAGEINKSLLTLGRVISALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIRNKPEVNQKMMKSTLIKDLYGEIERLKAEVYATREKNGVYIPKERYYHEESERKAMADQIEQMGVTIETQQKQQEDLQSKYIYQVQLCSDLSNKLNTTEKTLNKTSRLLANSEEEVKKCQYTLKEKDFIISEQRKAENALAHQACVLRADLEKAHDDNASLFLKIGRKDKLNSDNRTVVNNFEVEFAQQVGALRNTVSLSLSEQNEHLQCVEKLCYSFLGINDKTVIDLKKKVTALKELYISHNEAMQNVVRLHKAGSDATLNELSSIISSNGHSIEEFLASESVESDSIFDDLQNSLSTQQGELALFARELRNRLNLSVKQIKDISERSQELVDRLFEESKKLEDFALSADYMQMKNIGDFKQAYEEQSRSDAEKLIVDMTSLVTDHIRRQMDLVDAKLIDLRESGITNKAFFDGHVESLGDIVNHAKRKWQTFCVQAEKDTKDTADYSAAKHCRMEELLQQSVNTAESVSLHTKSTLEAVNKMGAKHISAAVSLVRNACDNNMQHDNEINSARLTAEEAVVKNSGDLIEQFDVMSAQEQECITGVVDMAKIHANTLEALREDHSSQTASIEHKSRETFQQFYRDYEPSGTTPLKCDPDVPSKGTIDSLRSLPMEQLVEEFRENNSYESSNEKEMKPSLIPRSPFSQLN	1007

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal1g1752	1007	Pfam	Kinesin motor domain	16	357	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	10	397	IPR027417	-
	Lal1g1752	1007	ProSiteProfiles	Kinesin motor domain profile.	10	357	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	ProSitePatterns	Kinesin motor domain signature.	257	268	IPR019821	GO:0003777\|GO:0005524\|GO:0007018
	Lal1g1752	1007	PANTHER	KINESIN-LIKE PROTEIN KIF11	4	1007	-	-
	Lal1g1752	1007	CDD	KISc_BimC_Eg5	8	366	-	-
	Lal1g1752	1007	PANTHER	125 KDA KINESIN-RELATED PROTEIN-LIKE	4	1007	-	-
	Lal1g1752	1007	MobiDBLite	consensus disorder prediction	980	1007	-	-
	Lal1g1752	1007	Coils	Coil	373	393	-	-
	Lal1g1752	1007	Gene3D	Kinesin motor domain	6	398	IPR036961	-
	Lal1g1752	1007	Coils	Coil	452	472	-	-
	Lal1g1752	1007	SMART	kinesin_4	8	365	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	PRINTS	Kinesin heavy chain signature	87	108	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	PRINTS	Kinesin heavy chain signature	224	241	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	PRINTS	Kinesin heavy chain signature	258	276	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	PRINTS	Kinesin heavy chain signature	307	328	IPR001752	GO:0003777\|GO:0005524\|GO:0007018\|GO:0008017
	Lal1g1752	1007	Coils	Coil	666	686	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal1g1752	Lal-Chr1	19888267	19895478	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal1g1752	10	387	Miscellaneous Gene Families	AT5G06670	37.596	2.67e-65	233

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal1g1752	K10398		-	gmx:100800246	1621.68

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lal1g1752	1	19888267	19895478	Lal1g1752	1	19888267	19895478	ECH