Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1699 ATGACTCTCTCAATCTCATCTTCCCTCACTCTCCATTCTCACTCATTCTTCAACCATCAACATCAACAACAACGCTCTTTCACCACCTCAAACGTCGTCGTATGCTCCGCTAAATCCCTCTATACTCCGAAGCTCACCGCCGCCGCCGCCGCCCGAATCGAATCGCTGAGTCAGGTTTCCGGCGTATTGGGTTGTCAATGGGGCGATGAAGGAAAAGGTAAACTCGTTGATATCTTAGCCCAGCATTTTGAAATCGTTGCTCGATGTCAGGGTGGAGCTAATGCTGGCCATACCATTTATAATTCGGAAGGGAAGAAGTTTGCCCTTCATCTTGTTCCATCCGGTATCCTTAATGAGGATACGCTGTGTGTTATTGGAAACGGAGTTGTGGTGCATCTGCCTGGGCTTTTTCAAGAAATCGATGGCCTTGAGTCGAATGGGGTTTCTTGCAAGGGAAGGATATTGATATCTGACCGCGCTCACCTGTTGTTTGATTTCCACCAAACAGTGGATGGGCTGAGAGAATCTGAGCTTGCTAAATCTTTCATTGGCACAACTAAAAGAGGCATTGGACCGTGTTACTCCAGCAAGGTTAACCGTAATGGCATTAGAGTAAGTGACTTGAGACACATGGATACTTTTCCTCAGAAGCTTGATCTTTTGTTATCGGATGCAGCATCAAGGTTCAAAGATTTCAAATATAGTCCAGACTTGCTCAAAAAAGAAGTTGAAAATTACAAGAGATATGCCGAAAGATTGGAACCCTTCATTGCTGATACTGTGCATGTCATGAATGATGCCATAGCACAAAAGAAGAAGATTTTGGTTGAAGGAGGTCAAGCAACCATGCTTGACATTGATTTTGGCACTTATCCCTTTGTTACTTCATCTAGCCCTTCTGCAGGTGGGATTTGCACTGGTCTTGGTATTGCTCCAAGAGCTATCGGCGATTTAGTTGGAGTGGTGAAAGCATACACTACAAGAGTTGGTTCTGGTCCTTTCCCGACAGAAATGTTGGGTCCAGGAGGTGATCTCCTTAGATTTGCTGGGCAGGAGTTTGGCACAACCACTGGCCGTCCTCGACGCTGTGGTTGGCTTGATATAGTTGCATTAAGATTCTCCTGTCAGATCAATGGTTTTTCCTCCCTGAATCTCACCAAGCTGGATGTTTTATCAGATCTCGATGAAATACAGTTAGGTGTCGCTTATAAGAATGTTGATGGCACCACAGTCAATTCATTCCCTTCAGATCTCCGTTTTCTAGAGCAATTGAAGGTTGAATATGAAGTATTTCCTGGATGGAAGTCCGATATTTCTAAAATTAGAAATTATTCCGACCTTCCAAAAGGCGCGAGGCAGTATGTGGAAAGGATAGAAGAGCTTGTTGGTACCCCTATCAACTACATCGGTGTTGGGCCGGGACGTGATGCTCTCATATATAAATGA 1446 0.4467 MTLSISSSLTLHSHSFFNHQHQQQRSFTTSNVVVCSAKSLYTPKLTAAAAARIESLSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFQEIDGLESNGVSCKGRILISDRAHLLFDFHQTVDGLRESELAKSFIGTTKRGIGPCYSSKVNRNGIRVSDLRHMDTFPQKLDLLLSDAASRFKDFKYSPDLLKKEVENYKRYAERLEPFIADTVHVMNDAIAQKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRAIGDLVGVVKAYTTRVGSGPFPTEMLGPGGDLLRFAGQEFGTTTGRPRRCGWLDIVALRFSCQINGFSSLNLTKLDVLSDLDEIQLGVAYKNVDGTTVNSFPSDLRFLEQLKVEYEVFPGWKSDISKIRNYSDLPKGARQYVERIEELVGTPINYIGVGPGRDALIYK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1699 481 Pfam Adenylosuccinate synthetase 62 479 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lal1g1699 481 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 158 256 IPR042110 -
Lal1g1699 481 ProSitePatterns Adenylosuccinate synthetase active site. 189 200 IPR033128 -
Lal1g1699 481 Hamap Adenylosuccinate synthetase [purA]. 1 481 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lal1g1699 481 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 322 481 IPR042111 -
Lal1g1699 481 SMART adenylsucc_synt 59 480 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lal1g1699 481 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 21 481 - -
Lal1g1699 481 CDD AdSS 58 480 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lal1g1699 481 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 66 73 IPR018220 GO:0005525
Lal1g1699 481 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 62 321 IPR042109 -
Lal1g1699 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 480 IPR027417 -
Lal1g1699 481 PANTHER ADENYLOSUCCINATE SYNTHETASE 21 481 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lal1g1699 481 TIGRFAM purA: adenylosuccinate synthase 62 479 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1699 Lal-Chr1 19429613 19436818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1699 K01939 - gmx:100792329 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1699 1 19429613 19436818 Lal1g1699 1 19429613 19436818 ECH
Lal11g1323 11 16851998 16855179 Lal1g1699 1 19429613 19436818 LSH