Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1657 ATGTCCATCGCCGGCGGCGACCAACTCTCTGAAACGAAGCTCTTCAGGCTTTGCCCGTTATGGAGTTCACGGAACGTTTCTTCTTCCTCCAATTCCACTCAAAATCTTCGTCACAGTAACACTTCTTCTTCTTCTTCTTCTTCCAAAACGGTGTCGTCGATGGCGAAGTCGTTGTTGCTCCTTCCCCGTCGAAGACTTCGTCTTGATCCTAAGAGTTATCTCTACTTTCCATATGAACCGGGGAAGCAGGTTAGGAGCGCTGTTCGGTTAAAAAACAAAACAAAATCTCATGTTGCCTTCAAGTTTCAAACTACCGCACCGAAGAGTTGTTATATGCGGCCTCCTGGAGGCATTCTCGCTCCTGGTGAAAGCTTGACTGCAACTGTGTTTAAGTTTGTAGAGCAGCCTGAAAACAATGAAAAGATGCCGGACCAGAAAAAGAAGGACAAGTTCAAAATCATGAGTCTCAAAGTGAAAGAAGGAGTGGACTATGTACCCGAACTGTTTGATGAACAAAGGGATCAAGTGGTGGTGGAGCGAATCTTGAGGGTTATATTTATAGATGCAGAACGGCGGAGTCCTGCTTTGGAAAAACTGGAAAGACAATTGGCTGAAGCTGATGCAGAACTTGAAGCTAGGAAGAAGCCTCCTGCAGAGGCAGGTCCTCGAGTTGCTGTGGAAGGACTTGTAATTGATGAATGGAAAGAAAGAAGGGAAAAGTATCTGGCGAGGCAGCAAGTTCAAGCAGTAGATTCGGTGTAA 762 0.4593 MSIAGGDQLSETKLFRLCPLWSSRNVSSSSNSTQNLRHSNTSSSSSSSKTVSSMAKSLLLLPRRRLRLDPKSYLYFPYEPGKQVRSAVRLKNKTKSHVAFKFQTTAPKSCYMRPPGGILAPGESLTATVFKFVEQPENNEKMPDQKKKDKFKIMSLKVKEGVDYVPELFDEQRDQVVVERILRVIFIDAERRSPALEKLERQLAEADAELEARKKPPAEAGPRVAVEGLVIDEWKERREKYLARQQVQAVDSV 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1657 253 Coils Coil 196 216 - -
Lal1g1657 253 SUPERFAMILY PapD-like 62 194 IPR008962 -
Lal1g1657 253 Pfam MSP (Major sperm protein) domain 66 175 IPR000535 -
Lal1g1657 253 Gene3D Immunoglobulins 62 189 IPR013783 -
Lal1g1657 253 ProSiteProfiles Major sperm protein (MSP) domain profile. 65 187 IPR000535 -
Lal1g1657 253 PANTHER VESICLE-ASSOCIATED PROTEIN 4-1 25 252 - -
Lal1g1657 253 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 25 252 IPR016763 GO:0005789
Lal1g1657 253 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1657 Lal-Chr1 18977940 18981483 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1657 - - pvy:116125133 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1657 1 18977940 18981483 Lal1g1657 1 18977940 18981483 ECH