Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1642 ATGGCTACTATGCAACTCCAATCCCTCACTCTTTCTCCTCCGATCACTGCTTCCTCCTTTACTCCCATTTTCCTTCGCCGGAGCTCCGTCAATTTCCCACACTACACCGGCATCAATCTCCGACACGCCTCCGTCACTCGCTTTAATGGCTCCAGAATCGCTCCCCGTATTTCACGTGTTGTTTGTGAGGCTCAAGATACTGCTTCTGAGGTGGCTGGCATTACTGATGCAAACTGGCAATCACTTGTCCTTGAATCCGAAACTCCAGTTTTGGTTGAATTCTGGGCTCCATGGTGCGGTCCTTGCCGTATGGTCCACCCAGTAATCGATGAGGTAGCACAGGACTATGCCGGGAAGCTCAAGTGTTTCAAACTCAATACCGATGAGAGTCCTTCAACCGCTACTCGTTACGGGATTCGAAGTATCCCAACTGTCATTATCTTCAAGAATGGTGAGAAGAAAGATGCAGTTATTGGCGCTGTGCTGAAGACAACATTGACCAAAAGCATAGAGAAGTTCTTGTGA 525 0.4857 MATMQLQSLTLSPPITASSFTPIFLRRSSVNFPHYTGINLRHASVTRFNGSRIAPRISRVVCEAQDTASEVAGITDANWQSLVLESETPVLVEFWAPWCGPCRMVHPVIDEVAQDYAGKLKCFKLNTDESPSTATRYGIRSIPTVIIFKNGEKKDAVIGAVLKTTLTKSIEKFL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1642 174 CDD TRX_family 77 171 - -
Lal1g1642 174 Pfam Thioredoxin 71 171 IPR013766 -
Lal1g1642 174 PANTHER GEO12009P1 1 174 - -
Lal1g1642 174 TIGRFAM thioredoxin: thioredoxin 75 173 IPR005746 GO:0015035
Lal1g1642 174 PRINTS Thioredoxin family signature 90 98 - -
Lal1g1642 174 PRINTS Thioredoxin family signature 98 107 - -
Lal1g1642 174 PRINTS Thioredoxin family signature 138 149 - -
Lal1g1642 174 ProSitePatterns Thioredoxin family active site. 91 109 IPR017937 -
Lal1g1642 174 ProSiteProfiles Thioredoxin domain profile. 62 174 IPR013766 -
Lal1g1642 174 SUPERFAMILY Thioredoxin-like 63 173 IPR036249 -
Lal1g1642 174 Gene3D Glutaredoxin 71 174 - -
Lal1g1642 174 PANTHER THIOREDOXIN M-TYPE PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1642 Lal-Chr1 18815937 18818328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1642 K03671 - gmx:100811845 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1642 1 18815937 18818328 Lal1g1642 1 18815937 18818328 ECH