Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1638 ATGGTGGGGATTGTAAACTTGGAGAAGAAATGGTTGTTTCCTCTCATGATCACTTCTGCTGCATGCATATTCTTTCTAGCAGCATCATTGAACATGGGACTAGTATCTACATTTCACTCCATCAATTCGATATTCTTTTTACCATCTTTGCCACACACAAATCAAACTTCGGCGGTATCTGTGGAGACAAAGGTTTTGATCCCTCCTGCTCCAGCTCCGGCTAGGCCTGCAATTCCTCGATTCGCTTATCTGGTTTCGGGTTCAAAAGGCGATTTGGAAAGGCTTTGGAGAACTCTTCTTGCGCTTTATCATCCACTAAACCATTATGTTCTTCATTTGGACCTTGAGGCATCCCTCGAGGAAAGGTCGGATCTTCTTACTAGAATTGAGAAGCATCATGTCTTCACCGAGGTTGGCAATGTTTTCGTAATTAAAAAGTCGAATCTGGTTACTTACAGAGGGCCGACGATGGTCTCTAATACTCTTCATGCTTGTGCTATTCTACTCAAGAGAAGTAGAGAATGGGATTGGTTTATTAATCTTAGTGCTTCAGATTATCCTCTTGTGACTCAGGATGATCTTCTATATAGTTTTACAGATATAGATCGAAGCTTTAACTTCATCGATCACACAAGTCGGTTAGGATGGAAGATGGAGAAACGAGCAAAGCCTATAATTATAGACCCGGGGCTTTACTTGACAACCAAGTCTGATGTATTTTGGGTCGAGCCGAAGAGGGCTTTGCCGACTGCATTTAAACTATTCACTGGTTCGGCATGGGTGATTTTATCGCATGAATTTGTCGAATATGTTATCTGGGGTTGGGACAATCTACCAAGGACACTGCTCATGTACTACACTAATTTTCTCTCTACCCCTGAAGGCTACTTTCACACTGTTGCATGCAATGTGCCAGAATTTGCTAAAACAATTGTCAATAGTGACTTGCATTATATTTCATGGGATGTCCCTCCAAAACAGCACCCTCACATCCTTAATATCAACGACATCGACAAAATGATCGAAAGTGGTGCTGCCTTCGCTCGAAAATTCAATCAAGATGTCCCAGTCTTGGATGTGATTGATAAAAAATTGATACATAAGAGAAGGGGACTGTCCACGATGGGCGGTTGGTGCATCGGTAAACCGAAATGTTCTGAGATTGGTGACATTTATAAACTCAAACCTGGTCCGGGAGCTCGAAGGCTTCAGTGA 1215 0.4239 MVGIVNLEKKWLFPLMITSAACIFFLAASLNMGLVSTFHSINSIFFLPSLPHTNQTSAVSVETKVLIPPAPAPARPAIPRFAYLVSGSKGDLERLWRTLLALYHPLNHYVLHLDLEASLEERSDLLTRIEKHHVFTEVGNVFVIKKSNLVTYRGPTMVSNTLHACAILLKRSREWDWFINLSASDYPLVTQDDLLYSFTDIDRSFNFIDHTSRLGWKMEKRAKPIIIDPGLYLTTKSDVFWVEPKRALPTAFKLFTGSAWVILSHEFVEYVIWGWDNLPRTLLMYYTNFLSTPEGYFHTVACNVPEFAKTIVNSDLHYISWDVPPKQHPHILNINDIDKMIESGAAFARKFNQDVPVLDVIDKKLIHKRRGLSTMGGWCIGKPKCSEIGDIYKLKPGPGARRLQ 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1638 404 Pfam Core-2/I-Branching enzyme 81 340 IPR003406 GO:0016020|GO:0016757
Lal1g1638 404 PANTHER OS01G0201100 PROTEIN 5 404 - -
Lal1g1638 404 PANTHER GLYCOSYLTRANSFERASE 5 404 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1638 Lal-Chr1 18789986 18793616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1638 6 404 Glycosyltransferase AT4G27480 65.664 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1638 - - gmx:100776045 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1638 1 18789986 18793616 Lal1g1638 1 18789986 18793616 ECH
Lal11g1430 11 17683661 17686831 Lal1g1638 1 18789986 18793616 LSH