Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1637 ATGGCCATCGCCGCCACCAACAACTCTATCGATTCCTCCCACTCCAATTCCCGTCGTTTCGAGGCCTACAACCGCCTCCAGGCCGCGGCGGTGGCGTTCGGTGAGAAGCTCCCAATCCCGGAGATCGTGGTCCTCGGTGGCCAATCGGACGGTAAGAGCTCCATCCTCGAAGCTCTCCTCGGCTTCCGCTTCAATGTCCGTGAAGTGGAGATGGGTACTCGCCGTCCGCTTATCCTCCAAATGGTTCATGACATTAATGCTCTTCAACCCCGTTGCTGCTTTCAGTGGTCATTGCAGCCGTTGTGTCCAAATGTGGTCCGATCCGATTATGTTGCGGCCGGACGTGACCACTTTATTGTGATTCGGTGTGATGCGGTTGCGGCAGTCACCGCAACTGCAATATTGTCGCCGCATCAGGAGGAGAATTCAGAAGAGTATGGGAGCCCTGTGGTTTTGGCATCTGCCATTGCTGACATTATTAAATCAAGAACAGAGGCGCTTTTGAAGAAAACTAGGACGTCAGTTTCTCCTAAGCCTATTGTAATGAGAGCTGAATACGCGCATTGTCCCAACCTCACTGTTATTGACACACCAGGCTTTGTTCTTAAGGCTAAGAAGGGTGAACCGGAGAATACACCTGAAGAAATTCTCTCAATGGTTAAGTCATTGGCTAGTCCTCCCCACCGCATACTATTGTTCCTTCAGCAAAGTAGTGTGGAGTGGTGCTCATCTTTGTGGTTGGACTCCATTCGTGAAATTGATCCAACATTTAGACGGACTGTGATTGTTGTTTCCAAATTTGATAATCGTCTCAGGGAATTTAGTGATCGCTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGATAGCACTCGCCCTTTTTTTGTGGCCCTGCCAAAAGACAGGGGTGACATTTCAAATGATGAGTTCCGCAGGCAGGTTTCGTTGGTGGACTCAGAGGTTCTTCATCATCTCCGTGAGGTTGTCAAGGGAGGTTTTGATGAAGAAAAGTTTATTTCCCATATTGGTTTTGCTTGCCTGAGAGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCCGCACCAGCAACTCTTGCATTGCTTGAGCAGCAATGCAGTGATGTGACAGCTGAAGGTGCATTTATCGACGGTGCAGCAGACCCTTCCCCTGAGCTGTGGGGGAAAACAACAGCCGAGGAGCAATCTCAAAGTGGTATTGGGGCATGGCCTGGCGTCATTACAGATATAAATCCCCCAAATGCCACTCTCCGTCTTTATGGAGGAGCTGCTTTTGAGAGGGTTATACATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCAAGTGTCAAGAGAGAAGGTTGCAAATATATTACTTGCCCATGGTGGCCGTGGTGGGGGAAGAGGGATAGCAGAGGCTGCTGCGGAGATTGCACGTGCTGCTGCTAAATCATGGCTTGCTCCACTTCTTGACAGTGCTTGTGATCGGCTTGCTTTTGTTTTAGGAAGCTTGTTTGATTTGGCGCTAGAAAGACACCACAGTCATGAATCAGAGTATGGGAGTAAAGCAGGAGACATGGATGGCTATGTAGGTTTTCATGCTGCAATAAGGTGCGCTTACAATCGCTTCGTAAAGGATCTTGCTAAGCAATGCAAACAACTAGTTAAGCACCAACTTGATTCAGTCACCAGTTCATACTCACAGGTGCTCTATGTTAATGACTTTCAACCATCTTATGGCATAAATGCTCCTTCTAATAAAAAATTCAGCCAGGCATCAGCCCCTTCATCTTTTCTTGAGTTGAGTGATACGAGCTCAGCTTCCCATGATGTAACGAGGGATCAGGAAAATATACCGCCACAGAAGAACACACAAGACACAACCCCAGGTAAATCTGCAGAAGGTAGACACACTTTGTTTGAAACCCACTTGACAATCCCTGAAACCCCATCTCTTGATCAGCCAGGTGATCCAGTATATGGGGGTAGTAGAAAAGAGCTTGGAATTCGCAATGACATGGGGCCAAGAAAAAGATTGCCTAGAATGACAGAAAATGGGAAAATTTCTGATCATAATAAAGTTCAAAATGGTGGTCTTTTATTTGGAAATGGGGATAATAGAACAGGTTCAGCTTATTCAGAAATCTGTTTTTCTGCGGCCCAGCATTTTGTACGTCTACGTGAGGTTCTTGTTGAACGAGGTGTGACATCAACATTAAATTCTGGATTCCTAACCCCTTGTCGAGATCGGCTTCTGGTTGCTCTCGGGTTAGATTTGTTTGCTCTGAATGATGTGAATTTCATGGACATGTTTGTTGCTCCTGGTGCTATAGATGTGCTGCAAACTGAACAAAAGTTTCTTAAGAAGCGTCAAAAGATACTCCAATTTTGCTTGATTGAGTTTAAAACTCTTACTCAAGAACTTTGA 2445 0.4622 MAIAATNNSIDSSHSNSRRFEAYNRLQAAAVAFGEKLPIPEIVVLGGQSDGKSSILEALLGFRFNVREVEMGTRRPLILQMVHDINALQPRCCFQWSLQPLCPNVVRSDYVAAGRDHFIVIRCDAVAAVTATAILSPHQEENSEEYGSPVVLASAIADIIKSRTEALLKKTRTSVSPKPIVMRAEYAHCPNLTVIDTPGFVLKAKKGEPENTPEEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTVIVVSKFDNRLREFSDRWEVDRYLSASGYLGDSTRPFFVALPKDRGDISNDEFRRQVSLVDSEVLHHLREVVKGGFDEEKFISHIGFACLRDYLESELQKKYKEAAPATLALLEQQCSDVTAEGAFIDGAADPSPELWGKTTAEEQSQSGIGAWPGVITDINPPNATLRLYGGAAFERVIHEFRCAAYSIECPQVSREKVANILLAHGGRGGGRGIAEAAAEIARAAAKSWLAPLLDSACDRLAFVLGSLFDLALERHHSHESEYGSKAGDMDGYVGFHAAIRCAYNRFVKDLAKQCKQLVKHQLDSVTSSYSQVLYVNDFQPSYGINAPSNKKFSQASAPSSFLELSDTSSASHDVTRDQENIPPQKNTQDTTPGKSAEGRHTLFETHLTIPETPSLDQPGDPVYGGSRKELGIRNDMGPRKRLPRMTENGKISDHNKVQNGGLLFGNGDNRTGSAYSEICFSAAQHFVRLREVLVERGVTSTLNSGFLTPCRDRLLVALGLDLFALNDVNFMDMFVAPGAIDVLQTEQKFLKKRQKILQFCLIEFKTLTQEL 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1637 814 Pfam Dynamin family 42 266 IPR045063 -
Lal1g1637 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 375 IPR027417 -
Lal1g1637 814 PANTHER DYNAMIN 17 812 IPR022812 -
Lal1g1637 814 SMART dynamin_3 16 311 IPR001401 GO:0003924|GO:0005525
Lal1g1637 814 MobiDBLite consensus disorder prediction 606 638 - -
Lal1g1637 814 MobiDBLite consensus disorder prediction 675 694 - -
Lal1g1637 814 PANTHER DYNAMIN-LIKE PROTEIN C 17 812 - -
Lal1g1637 814 CDD DLP_1 37 367 IPR001401 GO:0003924|GO:0005525
Lal1g1637 814 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 36 367 IPR030381 GO:0005525
Lal1g1637 814 Gene3D - 8 394 IPR027417 -
Lal1g1637 814 PRINTS Dynamin signature 39 57 IPR022812 -
Lal1g1637 814 PRINTS Dynamin signature 186 203 IPR022812 -
Lal1g1637 814 PRINTS Dynamin signature 255 271 IPR022812 -
Lal1g1637 814 MobiDBLite consensus disorder prediction 606 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1637 Lal-Chr1 18778155 18784919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1637 - - gmx:100786517 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1637 1 18778155 18784919 Lal1g1637 1 18778155 18784919 ECH