Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1635 ATGGCAGTTTCTCTGAACGGAATGAAGGTATCACAGGCATACCTTGAAGGGAAAGCAGTGAAAGAAACCAAAGCTTTAATGGCTGAACTGTGTCGCCAATTCTACACCCTTGGATGGGTTTCTGGGACAGGTGGCAGCATCACAATGAAAGTCCACGATGATTCCATTCCTAAGCCTCATCAGATTATACTCATGGCTCCTTCTGGTGTTCAGAAAGAAAGAATGGAACCAGAGGATATGTATGTATTATCCCAGGATGCGTCAGTCTTATCTGCTCCATCTCCCAAACCATACCCGCATAAGCCTCCCAAGTGTTCTGATTGTAGTCCACTTTTTATGAAGGCATATGAAATGTGTGATGCTGGGGCTGTTTACCACAGTCATGGGATAGAATCATGTCTTGTAACAATGATCAATCCTTTGTCAAAGGAATTTCGAATCACTCACATGGAAATGATAAAAGGAATCAAGGGGCATGGTTATTATGATGAACTTGTGATCCCTATAATCGAGAACACAGCCTATGAATATGAGCTCACAGATTCTTTTGCTAAAGCTATTGAAGCCTACCCAAAAACAACAGCAGTGCTTGTTCGCAACCACGGGGTATTTGTTTGGGGAGACTCATGGATAAGCGCTAAAACTCAGTCTGAGTGTTACCATTACCTCTTTGATGCTGCTATAAAACTTCATCAAATGGGATTGGACTGGTCTACTCCCGATCATGGTCCGATACAAAGTGCAAGAAGGGGTCAAAGGCTTGCTGGGGAGTCAATTCTTTCAGTTAAGTCAAGGAAAGCAGACGGTGAAATTGATCCATTCCCTCGTTGCATTGTTCTTGACATCGAAGGAACTACCACTCCCATATCATTTGTTTCAGAAGTTCTCTTCCCATATGCCCGTAATAATGTTGGGAGGCATCTATCTGCCACATATGATACCCCTGATACCCGGAATGATATCAAATTACTTCGCTCCCAAATTCAAAGTGACCTTGAACAAGGGATTGCAGGTGCTGTGCCTGTCCCCCCAGATGACGCTGGGAGAGAGGAAGTCGTTGCTGCCATAGTTGCTAACGTGGATGCTATGATTAAAGCTGATAGAAAGATCACTGCCTTGAAAGAGTTGCAAGGTCATATATGGAAAACTGGTTATGAGAATAATGAATTGGAGGGAATAGTTTTTGATGATGTACCAGAGGCTCTAGAAAAGTGGCATGCTTTGGGCATAAAGGTATACATATACTCTAGTGGTAGCAGGTTGGCGCAAAGGCTAATATTCGGAAAAACGAATTATGGGGATCTTAGAAAATATTTATCCGGGTTTTTTGACACCACTGTGGGGAACAAAAAAGAGACACAAAGTTATGTTAACATTTCTGAGTCACTCGGTGTCGATAAACCTTCTGATATTTTATTTGTCACTGATGTCTTTCAAGAAGCTACAGCTGCAAAGGCAGCAGGTTTGGAGGTGATAATTTCTATTCGACCCGGAAATGGACTCCTCCCTGAAAATCATGAGTTCAAGACAATCAAATCCTTCTCGGAGATATAA 1554 0.4247 MAVSLNGMKVSQAYLEGKAVKETKALMAELCRQFYTLGWVSGTGGSITMKVHDDSIPKPHQIILMAPSGVQKERMEPEDMYVLSQDASVLSAPSPKPYPHKPPKCSDCSPLFMKAYEMCDAGAVYHSHGIESCLVTMINPLSKEFRITHMEMIKGIKGHGYYDELVIPIIENTAYEYELTDSFAKAIEAYPKTTAVLVRNHGVFVWGDSWISAKTQSECYHYLFDAAIKLHQMGLDWSTPDHGPIQSARRGQRLAGESILSVKSRKADGEIDPFPRCIVLDIEGTTTPISFVSEVLFPYARNNVGRHLSATYDTPDTRNDIKLLRSQIQSDLEQGIAGAVPVPPDDAGREEVVAAIVANVDAMIKADRKITALKELQGHIWKTGYENNELEGIVFDDVPEALEKWHALGIKVYIYSSGSRLAQRLIFGKTNYGDLRKYLSGFFDTTVGNKKETQSYVNISESLGVDKPSDILFVTDVFQEATAAKAAGLEVIISIRPGNGLLPENHEFKTIKSFSEI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1635 517 Gene3D - 385 517 IPR023214 -
Lal1g1635 517 Pfam Class II Aldolase and Adducin N-terminal domain 26 227 IPR001303 -
Lal1g1635 517 PANTHER METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE 2 517 IPR017714 GO:0005737|GO:0019509|GO:0046872
Lal1g1635 517 SMART Aldolase_II_2 25 228 IPR001303 -
Lal1g1635 517 Gene3D - 289 384 - -
Lal1g1635 517 Pfam haloacid dehalogenase-like hydrolase 276 488 - -
Lal1g1635 517 SFLD enolase-phosphatase 276 516 IPR023943 GO:0000287|GO:0019509|GO:0043874
Lal1g1635 517 TIGRFAM enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 276 515 IPR023943 GO:0000287|GO:0019509|GO:0043874
Lal1g1635 517 TIGRFAM salvage_mtnB: methylthioribulose-1-phosphate dehydratase 27 232 IPR017714 GO:0005737|GO:0019509|GO:0046872
Lal1g1635 517 PANTHER BIFUNCTIONAL METHYLTHIORIBULOSE-1-PHOSPHATE DEHYDRATASE/ENOLASE-PHOSPHATASE E1-RELATED 2 517 - -
Lal1g1635 517 SUPERFAMILY HAD-like 276 517 IPR036412 -
Lal1g1635 517 Hamap Enolase-phosphatase E1 [mtnC]. 274 517 IPR023943 GO:0000287|GO:0019509|GO:0043874
Lal1g1635 517 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 12 517 IPR027505 -
Lal1g1635 517 Gene3D - 20 244 IPR036409 -
Lal1g1635 517 SUPERFAMILY AraD/HMP-PK domain-like 21 242 IPR036409 -
Lal1g1635 517 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 12 236 IPR027514 GO:0005737|GO:0019509|GO:0046872
Lal1g1635 517 CDD HAD_EP 277 498 IPR023943 GO:0000287|GO:0019509|GO:0043874
Lal1g1635 517 SFLD Haloacid Dehalogenase 276 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1635 Lal-Chr1 18757162 18764134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1635 K16054 - gmx:100817732 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1635 1 18757162 18764134 Lal1g1635 1 18757162 18764134 ECH