Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1623 ATGGCAATGTGTCACTTACGAGTCGTTCCTCACTCTCTTAATAACTTCACTCCCAAACACTCTCTTCTCAATAATCGCTTTTCCTTTTCCTCTTTCTCTTCAACAACAATAACAATGGCTTCTTCAATTTCTCCAAAGGTTTTGGTTCCTATTGCCAATGGCACTGAACCAATGGAAGCTGTTATCACAATCGATGTTCTTCGACGATCCGGTGCTGACGTCACCGTTGCTTCTGCTAGTAACCATCTTCAAGTCCAAGCTCTCCATGGAATCAAGATTGTCGCCGACGCTGTCGTTTCGGACCTCGCCGACACCGTTTTCGATCTCGTAGCTCTTCCTGGAGGTGTTCCTGGCGTTGATAATCTTAGAGATAGCGAAGTTTTGGAGGGGTTAGTGAAAAAGCATGTCGAGGATGGTAGGCTTTATGCTGCAGTGTGTGCAGCTCCAGCTGCGGTACTTGGGCCATGGGGTTTACTCAAGGGGTTGAAGGCAACTTGTTACCCATCATTTATGGAAAAATTGGCATCTTACACTACTACTGTTGAGTCAAGAGTGCAGCTGGATGGCAGAGTTGTGACGAGTCGGGCGCCAGGCACAACCATGGAGTTCGCTGTTGCACTGGTTGAGCAATTATATGGGAAAGAGAAAGCTGATGAAGTTGCAGGTCCACTGGTCATGCGTTCTAATCATGGTGATGAATATACTTTTAAGGAGATAAACCCAGTACAATGGACATTTGACAATCCTCCTAAGATTCTTGTACCGATTGCTAATGGCACAGAGGAAATGGAAGCTGTGATTATCATTGATATTCTGCGGAGAGCAAAGGCAGATGTTGTGGTTGCTTCCGTCGAGGACAAACTAGAGATTGGGGCTTCGCGTAAAGTTAAACTTGAGGCAGATGTGCTCCTTGATGAGGCAGCCAAGCATTCATACGACCTTATTGTGTTGCCAGGTGGACTTGGCGGTGCCGAAGCTTTTGCAAACTCAGAAACCTTGGTGAATTTGCTGAAAAAGCAAAGAGAATTGAACAGATATTATGGAGCAATTTGTGCATCCCCAGCTTTAGTCTTGGAGCCCCATGGTTTGCTAAAGGGTAAAAAGGCCACTGCTTTCCCTGCCATGTGCAACAAGTTATCAGATCAGAGTGAAGCAGAAAACAGAGTTGTAGTTGATGGCAATCTTATTACCAGCAGAGGCCCAGGAACCTCGATTGAGTATGGATTAGCTATTGTGGAAAAGCTGTTTGGAAGAAAAGTTGGACTAGAACTTGCAAAGACAATTGTGTTCACCAACCCATAG 1302 0.4539 MAMCHLRVVPHSLNNFTPKHSLLNNRFSFSSFSSTTITMASSISPKVLVPIANGTEPMEAVITIDVLRRSGADVTVASASNHLQVQALHGIKIVADAVVSDLADTVFDLVALPGGVPGVDNLRDSEVLEGLVKKHVEDGRLYAAVCAAPAAVLGPWGLLKGLKATCYPSFMEKLASYTTTVESRVQLDGRVVTSRAPGTTMEFAVALVEQLYGKEKADEVAGPLVMRSNHGDEYTFKEINPVQWTFDNPPKILVPIANGTEEMEAVIIIDILRRAKADVVVASVEDKLEIGASRKVKLEADVLLDEAAKHSYDLIVLPGGLGGAEAFANSETLVNLLKKQRELNRYYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEAENRVVVDGNLITSRGPGTSIEYGLAIVEKLFGRKVGLELAKTIVFTNP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1623 433 SUPERFAMILY Class I glutamine amidotransferase-like 45 228 IPR029062 -
Lal1g1623 433 Pfam DJ-1/PfpI family 251 413 IPR002818 -
Lal1g1623 433 Pfam DJ-1/PfpI family 46 210 IPR002818 -
Lal1g1623 433 SUPERFAMILY Class I glutamine amidotransferase-like 249 430 IPR029062 -
Lal1g1623 433 CDD GATase1_DJ-1 47 211 - -
Lal1g1623 433 CDD GATase1_DJ-1 252 415 - -
Lal1g1623 433 Gene3D - 39 238 IPR029062 -
Lal1g1623 433 Gene3D - 246 432 IPR029062 -
Lal1g1623 433 PANTHER BNAA06G01020D PROTEIN 42 428 - -
Lal1g1623 433 TIGRFAM not_thiJ: DJ-1 family protein 46 222 IPR006287 -
Lal1g1623 433 TIGRFAM not_thiJ: DJ-1 family protein 251 425 IPR006287 -
Lal1g1623 433 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 42 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1623 Lal-Chr1 18648948 18653091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1623 K03152 - gmx:100803116 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1623 1 18648948 18653091 Lal1g1623 1 18648948 18653091 ECH