Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1595 ATGGGTTTTTCTAGACTGTGTGTACCAATGAGACGTTGGTATAGTGGTGCAAGGCCCACTGGATCCCCAAGCATCGTACTAGGCCGAAGTTGGAAACGACCTCATGGAAGATCCCTATCGGTTATCACTGGCCTAGATTATTGGCAGTCCGAAGCGTATTTGATGGAAATATCCAATGAGTCGGTCATTAAGAAATCAAAAAGGCTGACTTCTGTTGTATGGAATCACTTTGAAAGAGTTAGGAAGGCTGACACATGTTATGCTATTTGTGTGCATTGTAACAAGAAACTTAGTGGATCAAGTAACAGTGGAACTACTCATCTGAGGAATCACTTGATGCGATGTCTGAAAAGGTCGAACTTTGATGTGTCTCAACTACTCTCAGCAAAGAGAAGGAAAAAAGATAATACCCTCACTGTTGCGAATATTGGTTTTGATGAAGGTCATGCGAAAGAAGAATACATAAAGCCAACAATCATCAAGTATGAACCAGATCACAAGAAAGATGAAATCATTAACTTTGGGGGTCGGAAGTTTGATCAGGAGAAGAGTCGACTTGATCTCGCACGCATGATCATATTACATGGATACCCATTGGACATTGTTGGACATGTGGGGTTCAAGGTCTTTGTGAAGAACCTCCAGCCACTCTTTGAGTTTGTGCCAAATAGTGCTATAGAGATTTCTTGTATGGAAATCTACAGGAGGGAGAAAGAGAAAGTGTATAACATGATAAAGAAATCACAACGTAGGATTAATCTGTCAATTGAAAGGTGGTCTTTAGCAGAAAATTCTTCATATTTGTGTATAGTTGCACATTATATCGATGAGGAATGGACATTACGGAAGAAGATCCTGAACTTTGTCACACTTGATTCTTCCCATACCGAAGACTTGCTTCCAGAAGTGATCATTAAATGTCTGAATGAGTGGGATATAGACTGTAAGCTGTTTGCCTTAACATTAGATGATTTTTTTGTTGATAATGACATCACACTTATAATCCAACAGCGAGTTTCCTTGAAAAGGTCATTTCTTAGCACTCGTCGATTACTTGACATCCGCTCCGCAGCACATCTCTTAAACTCTATGGTTCAAGATACCATAGATGCACTGCATGAGGTGATCCAAAAGATTCGAGAAAGCATAAGATATATTAGAAGTTCACAAGAAGTGCAAGGGAAATTTAATGAAATTGCTCAACAAGCTGGAATTGACTCTCGGAAGGCCCTGATTCTTGATTTTCCAGTTCATTGGAAGTCAACATATCTCTTGCTTGAAACAACAGTAGAATACAGGACTGCTTTTTTGCTCTTCCAAGAGCATGATCTCTCCTATTCATCAGCTCTAACTGATGAAGAGTGGGAATGGGCAACTTCCGTTATTGGTTATTTGAAACTTTTCCTTGAAATTATCAATGTCTTCTCAAGCAACTTGTTTCCTTCTGCAAGTATATATTTCCCTGAGATTTGTGACATTCATATCCAATTAATTGACTGGTGCAGAAGTTCAGATAGCTTTCTTAGTTCAGTGGCGTTGAAGATGAAAGTCAGGTTTGATATGTACTGGAGCAAGTGCAGTACGGCTTTAGCAGTAGCAGCTATATTAGACCCTCGGTTTAAAATGAAGTTGGTTGAATACTACTACTCCCAGATTTATGGCAGCACTGCTTTGGATCGTATCAAAGAAGTTTCTGATGCAGTCAAAGAACTTTTCAATGCGTATTCTATCTGTTCAACTATGGTTGATCAAGGGTTATCTTTGCCCGGCAATAGCTTACCTAGTACAAGTTATGATGCTAGGGATAGACTGAAGGGCTTTGACAAATTCCTTCATGAGACATCACAGAGTCACAGCATAGCATCAGACTTAGACAAGTACTTGGAGGAACCAATCTTTCCTCGTAGTTCCGATTTTAACATATTAAACTGGTGGAAAGTCCACATGCGAAGGTACCCTATCTTGTCTATGATGGCACGTGATGTTCTTGCCACTCCAATGTCAACAGTGGCACCAGAATTGGCATTTAGCACCGAAGGGAGATTGCTAGATCCTACTCATGTTTCATTAAACCCCGATACACGACAGGCTTTAATATGCACACAAGATTGGCTCCGAAATGAATCAGGAGATTTAAATCCATCTCCAAGCCATTTTGCTCTACCCCTTATCATTGAATAA 2181 0.3998 MGFSRLCVPMRRWYSGARPTGSPSIVLGRSWKRPHGRSLSVITGLDYWQSEAYLMEISNESVIKKSKRLTSVVWNHFERVRKADTCYAICVHCNKKLSGSSNSGTTHLRNHLMRCLKRSNFDVSQLLSAKRRKKDNTLTVANIGFDEGHAKEEYIKPTIIKYEPDHKKDEIINFGGRKFDQEKSRLDLARMIILHGYPLDIVGHVGFKVFVKNLQPLFEFVPNSAIEISCMEIYRREKEKVYNMIKKSQRRINLSIERWSLAENSSYLCIVAHYIDEEWTLRKKILNFVTLDSSHTEDLLPEVIIKCLNEWDIDCKLFALTLDDFFVDNDITLIIQQRVSLKRSFLSTRRLLDIRSAAHLLNSMVQDTIDALHEVIQKIRESIRYIRSSQEVQGKFNEIAQQAGIDSRKALILDFPVHWKSTYLLLETTVEYRTAFLLFQEHDLSYSSALTDEEWEWATSVIGYLKLFLEIINVFSSNLFPSASIYFPEICDIHIQLIDWCRSSDSFLSSVALKMKVRFDMYWSKCSTALAVAAILDPRFKMKLVEYYYSQIYGSTALDRIKEVSDAVKELFNAYSICSTMVDQGLSLPGNSLPSTSYDARDRLKGFDKFLHETSQSHSIASDLDKYLEEPIFPRSSDFNILNWWKVHMRRYPILSMMARDVLATPMSTVAPELAFSTEGRLLDPTHVSLNPDTRQALICTQDWLRNESGDLNPSPSHFALPLIIE 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1595 726 SMART bed5 68 118 - -
Lal1g1595 726 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 1-LIKE 58 709 - -
Lal1g1595 726 SUPERFAMILY Ribonuclease H-like 241 707 IPR012337 -
Lal1g1595 726 ProSiteProfiles Zinc finger BED-type profile. 68 123 IPR003656 GO:0003677
Lal1g1595 726 PANTHER BED FINGER-RELATED 58 709 IPR045259 -
Lal1g1595 726 Coils Coil 231 251 - -
Lal1g1595 726 Pfam Domain of unknown function (DUF4413) 476 575 IPR025525 GO:0003677
Lal1g1595 726 Pfam hAT family C-terminal dimerisation region 623 705 IPR008906 GO:0046983
Lal1g1595 726 SUPERFAMILY beta-beta-alpha zinc fingers 71 118 IPR036236 -
Lal1g1595 726 Pfam BED zinc finger 71 114 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1595 Lal-Chr1 18351751 18355430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1595 - - gmx:106794558 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1595 1 18351751 18355430 Lal1g1595 1 18351751 18355430 ECH