Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1589 ATGCAATCTTCATTTGCATGTTCTTCACTTCCACATGGAAATCTACTTCTTCCAATAACCCTTTCTCCCAAACCTAACTCCATTTTTACTTTCTTCTCTCGAACCAAATCTTCCTCTAATTTCACACCCAGATGCACATTTCAACCTCACCCATTACATATCTCATCTCCTCCATCAAAATCACTCAGAATTTCTAGCTCCAATGTTACTCCACTTCTGTGCGGCATTTCGTCGAATGGGTACAGTGCAAATGAAGGTCGGAGTATTAGGGAGTGGGCTGAAGTGGTTGGTGATGCAATTTCAACTGCATTTCCGTTGTGGGTAACAATTGGGTGTGTGTTGGGGTTAATGAAACCAAGTTCTTTCAATTGGGTCACTCCACAAATGAACATGGTTGGCCTCATTATCGTTATGCTTGGTATGGGTATGACTCTCACTCTTGAAGATCTTCGTGGGGCTCTTTCTATGCCTAAGGAAGTTCTCTCTGGGTTTTTTCTTCAATATTCGGTGATGCCATTATCTGGATATTTTGTAAGCAAACTCTTAAATCTTCCACCACATTATGCAGCAGGATTAATATTAGTTGGTTGCTGTCCAGGAGGCACAGCAAGTAATATTGTGACTTATCTTGCACGTGGAAACGTCGCACTTTCTGTGATAATGACAGCTGCAAGTACTGTATCAGCCGTGGTCCTGACTCCTCTTCTGACAGCCAAACTTGCTGGTAAATATGTAGCTGTGGACGCAGCTGGCTTATTGATGTCAACATTACAAGTTGTGCTCTTACCCGTATTGGCCGGTTCAATTCTGAATCAGTATTTCCAACCTCTTGTTAAACTTGTCTCTCCATTGATGCCACCCATGGCTGTAGCGACTGTGGCAATTTTGTGCGGAAATGCAATTGCCCAGAGTTCTTCAGCCATCCTTATGTCCGGTGGACAAGTAGTTTTAGCATCATGCATTCTTCATGCTTCTGGCTTTTTCTTCGGTTACATACTTGCTAGGTTTCTCGGGATAGACATGTCGTCATCCCGAACAATATCCATCGAGGTTGGAATGCAGAACTCAGTGCTTGGGGTTGTTCTTGCTGCTCAGCACTTTGGAGATCCCCTAACTACAGTACCCTGTGCTGTTTCAAGTGTGGTTCACTCAGTCTTTGGTAGTATCCTAGCAGGATTTTGGAGACACTCTGTGCCTGTTGAGAAGAAGGACTGA 1215 0.437 MQSSFACSSLPHGNLLLPITLSPKPNSIFTFFSRTKSSSNFTPRCTFQPHPLHISSPPSKSLRISSSNVTPLLCGISSNGYSANEGRSIREWAEVVGDAISTAFPLWVTIGCVLGLMKPSSFNWVTPQMNMVGLIIVMLGMGMTLTLEDLRGALSMPKEVLSGFFLQYSVMPLSGYFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYLARGNVALSVIMTAASTVSAVVLTPLLTAKLAGKYVAVDAAGLLMSTLQVVLLPVLAGSILNQYFQPLVKLVSPLMPPMAVATVAILCGNAIAQSSSAILMSGGQVVLASCILHASGFFFGYILARFLGIDMSSSRTISIEVGMQNSVLGVVLAAQHFGDPLTTVPCAVSSVVHSVFGSILAGFWRHSVPVEKKD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1589 404 PANTHER SODIUM-BILE ACID COTRANSPORTER 64 404 IPR004710 -
Lal1g1589 404 Pfam Sodium Bile acid symporter family 131 306 IPR002657 GO:0016020
Lal1g1589 404 PANTHER SODIUM/METABOLITE COTRANSPORTER BASS1, CHLOROPLASTIC-RELATED 64 404 - -
Lal1g1589 404 Gene3D - 88 397 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1589 Lal-Chr1 18274895 18278858 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1589 36 404 Organic Solute Cotransporters AT1G78560 68.123 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1589 K03453 - pvy:116128267 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1589 1 18274895 18278858 Lal1g1589 1 18274895 18278858 ECH