Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1342 ATGGCTACTATTGTTGGTTCTTCTTCAACCAATGTTATGTCCTATGCATTGAAGAATGATTCACAATTTCATAGTAAATTCAATGCAGTCAAAGGAAGAAAAAACTCATCCTTATTGTTTTCTTGCATTTGCCTTGGAAGCCGAGCTAGTAACCATTTTCATCTCAGATCCTCAAATGGGTTACCTCTAAATGTTGTTTCTTCTCATGATGGTTTGGCTGGAATTTCACTGGCTAAAGAAGATAAAAAGCATCAACCAGTTGAAGGATCATTTCCATTGGCAGGCTCAGAATGCAAAGGATCCAACCTTAGCATAACTGTTGTTGGAGCTTCTGGAGACCTTGCGAAAAAGAAGATATTTCCAGCACTCTTCGCGCTTTATTACGAAGATTGGCTACCCGAGAATTTTATTGTGTTTGGATATGCACGGACTAAAATGACTGATGAAGAATTAAGGAATATGATTAGCCGAACTCTAACATGCAGAATCGATAAGAGGGAAAACTGTGAAGACAAAATGGATCAATTCTTAAAAAGGTGCTTTTACCATTCTGGTTTGTACAATTCTGAGGACCATTTTTCAGATTTGGATTGCAAACTCAAAGAGAAAGAGGATGGAAAACTTGCAAACAGGTTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGTGGTGAGATGTGCTAGCCTTAAAGCTTCGTCGAAAAATGGCTGGACGAGGGTCATTGTTGAAAAGCCATTTGGTCGTGACTTAGAATCATCGAGTAATCTAACAAGATGTTTGAAGCAGTATCTCACAGAAGACCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTCGTGGAGAATCTATCCGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTATGGTCCCGGGACTACATTCGCAATGTGCAGCTAATATTTTCCGAAGATTTTGGAACCGAGGGTCGAGGCGGTTATTTTGACAACTACGGAATCATTCGCGACATAATGCAAAACCATCTTCTGCAAATACTTGCATTGTTTGCAATGGAAACTCCTGTTAGCTTGGATGCTGAGGATATCAGAAATGAAAAGGTGAAGGTTCTGAGATCAATGAGACCACTACAACTGGAAGATGTTGTTATTGGTCAATATAAAGGCCACAGCAAGGGTAGCAAATCATATCCTGCTTATACAGATGACCCAACTGTTCCGAATGGTAGTCTTACGCCGACATTTGCAGCAGCGGCTCTTTTTATTAACAATGCTAGATGGGATGGAGTTCCTTTTCTCATGAAGGCTGGCAAGGCTCTCCATACTAAACGTTACATAGATCATAATGTATCCAGTGCAGAAATCAGAGTACAATTCAGACATGTCCCGGGTAACTTGTACAAGCGGAATTTTGGAACCGATCTGGACAAGGCCACCAATGAGCTTGTGCTTCGCGTACAACCTGATGAAGCTATATATTTGAAGATCAACAACAAAGTACCTGGTCTGGGAATGAGATTAGATCGAAGCGACTTAAATTTGCTTTACCGAGCAAGGTATCCAAGAGAAATACCAGATGCATATGAGAGGCTGCTGTTAGATTCCATCGAAGGCGAGCGAAGGTTGTTCATTAGAAGCGATGAACTGGATGCAGCTTGGGCACTATTTACTCCTTTGCTTAAAGAAATCGAGAACAAGAAGATCGGTCCGGAGCTCTATCCCTATGGAAGCAGAGGACCAGTTGGAGCACATTACCTTGCTGCAAAGCACAATGTAAGATGGGGTGATCTTAGTACTGATGATTGA 1794 0.4097 MATIVGSSSTNVMSYALKNDSQFHSKFNAVKGRKNSSLLFSCICLGSRASNHFHLRSSNGLPLNVVSSHDGLAGISLAKEDKKHQPVEGSFPLAGSECKGSNLSITVVGASGDLAKKKIFPALFALYYEDWLPENFIVFGYARTKMTDEELRNMISRTLTCRIDKRENCEDKMDQFLKRCFYHSGLYNSEDHFSDLDCKLKEKEDGKLANRLFYLSIPPNIFVDVVRCASLKASSKNGWTRVIVEKPFGRDLESSSNLTRCLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRDYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPLQLEDVVIGQYKGHSKGSKSYPAYTDDPTVPNGSLTPTFAAAALFINNARWDGVPFLMKAGKALHTKRYIDHNVSSAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLYRARYPREIPDAYERLLLDSIEGERRLFIRSDELDAAWALFTPLLKEIENKKIGPELYPYGSRGPVGAHYLAAKHNVRWGDLSTDD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1342 597 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 288 590 IPR022675 GO:0004345|GO:0006006|GO:0050661
Lal1g1342 597 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 275 590 - -
Lal1g1342 597 PRINTS Glucose-6-phosphate dehydrogenase signature 241 254 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 PRINTS Glucose-6-phosphate dehydrogenase signature 265 293 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 PRINTS Glucose-6-phosphate dehydrogenase signature 317 334 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 PRINTS Glucose-6-phosphate dehydrogenase signature 335 351 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 PRINTS Glucose-6-phosphate dehydrogenase signature 422 448 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 103 591 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 107 285 IPR022674 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 92 596 - -
Lal1g1342 597 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 102 592 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 Gene3D - 99 273 - -
Lal1g1342 597 Gene3D Dihydrodipicolinate Reductase; domain 2 274 591 - -
Lal1g1342 597 ProSitePatterns Glucose-6-phosphate dehydrogenase active site. 275 281 IPR019796 GO:0004345|GO:0006006
Lal1g1342 597 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 92 596 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lal1g1342 597 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 288 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1342 Lal-Chr1 15186759 15191915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1342 K00036 - gmx:100801945 1023.08