Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1322 ATGGAAAAGGAAGTGGAACTTTCTTCTGTTCATCTCAAAAAGCATTCTGAAATCATTGTTCAAAAGCAAAAGGGTGGCCTTGTAACCATGCCTTTCATCATAGCAAATGAAGCACTTGCAAGGGTTGCAACTTTGGGCCTTTTGCCAAACATGATATTGTATTTGATGGGGAACTATCATCTTCATTTGTCACATGCTACACATATGCTCCTCTTATCTGTTGCAACCAACAATTTCACTCCTCTTATTGGTGCTTTCATAGCTGATTCTTATCTGGGTCGATTCCTCGCTGTTGGTTTAGGTTCCTTCATCACTTTCCTGGGAATGGCACTTTTGTGGCTAACAGCCATGATCCCACAGGCAAGGCCGGCTCGTTGCGATCCTGCAACCGAAAAATGTGAATCAGCAACAAATGGACAAATGGCAATGTTACTATCTTCCCTTGCTATTATGGCCATAGGGAATGGTGGCCTTCAATGTTCCCTTGCTTTTGGTGCAGACCAGGTGAATAAGAAAGATAACCCCAATAACCAGAGGGCCTTGGAAATATTCTTCAGCTGGTATTATGCTTCGACCGCTATTTCTGTCATAATGGCCTTCACCGGAATAGTATATATCCAAGATCACTTTGGATGGAAACTAGGCTTTGGAGTTCCATCGGCACTTATGTTCTTATCAACTTTCTTCTTTTTCCTTGCTTCTCCACTTTATGTAAAGAATAAAATACACAGCAGCTTGCTCACTAGCTTTGCACAAGTAACAGTTGTGGCCTATAAGAACCGGAAACTTCGATTACCACCTAAGAACTCACCTGGAATGTTCCATCATAAGAAGGACTCCGATCTTCTTGTTCCAACGGATAAACTGAGGTTTCTGAATAAAGCTTGCTTTATTAAAGACCCAGAAAAAGATATAGCTCCCGATGGGTCGGCGTCATGTCCATGGAGTCTCTGCTCAATAGATCAAGTAGAAGAGCTAAAAGCCATTGTTAAAGTTTTTCCGATGTGGTCGACCGGGATCCTGATGTCACTTAACATTGGAGGATCCTTTGGATTGCTGCAAGCTAAATCCTTGAATAGACATATCACTTCAAACTTCGAAGTCCCGGCAGGTTCTCTTTCTGTAATCATGATATTTACAATATTTGTATGGATAGCTCTTTACGATCGTGTCGTTATTCCTCTTGCATCAAAGCTCAGAGGAAAACCAGTTAGGATCAGTGCCAAGAGAAGAATAGGAATAGGTTTGTTTTTCTCTTTTCTTCACTTGGTAACTGCAGCTATTGTTGAGACTAAACGGCGAAAGAGAGCGATCAAGGAGGGTTATGTTAACAATACTCATGCAGTGTCGAATATGTCTGCTATTTGGCTTTTCCCTCAACTTTGTTTGGGGGGAATAGCTGAAGCGTTCAATGCGATAGGCCAAAATGAGTTCTACTACGCCGAGTTTCCTAAGACTATGTCGAGCATTGCGTCGTCCCTTTTTGGACTAGGAATGGTTCCAGGGTACTTGTTGTCTTCTTTGTTATTCAAAATTGTGGAAAAAGTCACTTCAAGAGGAGGAAAGGATGGATGGATTTCCGATAATATTAACATCGGTCGATATGACAAGTACTACTGGGTTCTTGCTACACTGAGCGCTGTTAATATATTGTATTATTTAGTATGTAGTTGGGTTTATGGACCTTCTGCTGATGAAGAACTCAAGGTATCTGAAGAAAATGGTTCTAATGAGGAAGAATTACCATTAATGGAGTTCGGGATCGAGGATCAATATGACAAGGTATCCTAG 1791 0.4132 MEKEVELSSVHLKKHSEIIVQKQKGGLVTMPFIIANEALARVATLGLLPNMILYLMGNYHLHLSHATHMLLLSVATNNFTPLIGAFIADSYLGRFLAVGLGSFITFLGMALLWLTAMIPQARPARCDPATEKCESATNGQMAMLLSSLAIMAIGNGGLQCSLAFGADQVNKKDNPNNQRALEIFFSWYYASTAISVIMAFTGIVYIQDHFGWKLGFGVPSALMFLSTFFFFLASPLYVKNKIHSSLLTSFAQVTVVAYKNRKLRLPPKNSPGMFHHKKDSDLLVPTDKLRFLNKACFIKDPEKDIAPDGSASCPWSLCSIDQVEELKAIVKVFPMWSTGILMSLNIGGSFGLLQAKSLNRHITSNFEVPAGSLSVIMIFTIFVWIALYDRVVIPLASKLRGKPVRISAKRRIGIGLFFSFLHLVTAAIVETKRRKRAIKEGYVNNTHAVSNMSAIWLFPQLCLGGIAEAFNAIGQNEFYYAEFPKTMSSIASSLFGLGMVPGYLLSSLLFKIVEKVTSRGGKDGWISDNINIGRYDKYYWVLATLSAVNILYYLVCSWVYGPSADEELKVSEENGSNEEELPLMEFGIEDQYDKVS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1322 596 CDD MFS_NPF1_2 30 560 - -
Lal1g1322 596 Pfam POT family 97 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal1g1322 596 SUPERFAMILY MFS general substrate transporter 45 557 IPR036259 -
Lal1g1322 596 MobiDBLite consensus disorder prediction 570 596 - -
Lal1g1322 596 PANTHER PEPTIDE/NITRATE TRANSPORTER 14 568 - -
Lal1g1322 596 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 84 108 IPR018456 GO:0006857|GO:0016020|GO:0022857
Lal1g1322 596 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 568 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal1g1322 596 Gene3D MFS general substrate transporter like domains 2 567 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1322 Lal-Chr1 14941418 14945177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1322 21 580 Organic Solute Cotransporters AT1G52190 55.458 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1322 - K14638 gmx:100804235 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1322 1 14941418 14945177 Lal1g1322 1 14941418 14945177 ECH
Lal1g1322 1 14941418 14945177 Lal18g0176 18 1446702 1449971 LSH