Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1319 ATGAAAATAGAAGAAGTTCAATCAACAAGCAAGAAGCAACGTATTGCTACTCACACTCACATCAAAGGCCTCGGTCTTCAGGGGAATGGAAGAGCATTACCACTTGGTGCTGGATTTGTGGGGCAAGAAGAGGCAAGAGAAGCATCGGGTATTGTGGTCGACATGATACGACAGAAGAAGATGGCTGGCCGTGCACTCCTTTTTGCCGGTCCCCCTGGAACCGGAAAGACAGCGTTAGCACTTGGGATAAGTCAAGAGCTTGGAACCAAGGTTCCATTCTGCCCAATGGTTGGCTCAGAAGTTTACTCATCAGAAGTAAAGAAGACTGCAGTTCTCATGGAAAATTTTCGACGTGCCATTGGTCTACGTATGAAGGAGAATAAGGAAGTTTATGAAGGAGAGGTAACTGAGCTAACTCCGGAAGAAAATGAGAGTGCTACGGCTGGTTATGGTAAAAGTGTAAGCCATGTGGTTATTGGATTGAAAACAGTGAAAGGAACCAAGCAATTGAAGTTGGACCCAACCATATATGATGCCTTGATTAAAGAAAAGGTAGCTGTTGGGGATGTTATATACATTGAAGCGAATAGTGGAGCTGTGAAACGGGTGGGCCGAAGTGATGTTTTTGCTACAGAGTTTGACCTTGAAGCTGAAGAGTATGTCCCACTTCCTAAGGGAGAGGTTCACAAAAAAAAGGAGATTGTTCAGGATGTAAGCCTTCACGATCTTGATGCTGCCAATGCACAACCTCAAGGTGGGCAAGATATATTGTCTCTTATGGGTCAGATGATGAAACCCCGGAAAACAGAAATCACTGACAAGCTAAGACAAGAAGTTAACAAGGTTGTGAACCGATATCTTGACGAAGGTGTAGCAGAGCTTGTCCCTGGAGTTTTATTTATTGATGAGGTGCATATGCTAGATGTGGAGTGTTTTTCCTATCTGAATCGTGCTTTAGAGAGCTCCCTATCTCCTATAGTAATCTTTGCTACAAATAGAGGAATATGCAATGTGAGAGGGACTGATATGACCAGTCCTCACGGCATTCCTGTTGACCTGTTGGATCGGTTGGTGATCATTCGAACACAAACCTATGGTCCTGCTGAAATGATACAGATTCTAGCTGTTCGTGCTCAAGTAGAGGAACTGGTTGTCGATGAGGAAAGTTTAGCTTTCCTTGGGGAGATTGGACAACGGTCATCTTTAAGGCATGCGGTTCAGCTTTTATCACCTGCCAGCATTGTTGCAAAATTGAAAGGCAGAGACAAAATAAGCAAGACGGATATTGACGAAGTTAGTTCACTATACTTGGATGCCAAGTCATCAGCCAAGTTACTTGGAGAGCAGCAGGAAAAATACATCTCATAA 1368 0.4379 MKIEEVQSTSKKQRIATHTHIKGLGLQGNGRALPLGAGFVGQEEAREASGIVVDMIRQKKMAGRALLFAGPPGTGKTALALGISQELGTKVPFCPMVGSEVYSSEVKKTAVLMENFRRAIGLRMKENKEVYEGEVTELTPEENESATAGYGKSVSHVVIGLKTVKGTKQLKLDPTIYDALIKEKVAVGDVIYIEANSGAVKRVGRSDVFATEFDLEAEEYVPLPKGEVHKKKEIVQDVSLHDLDAANAQPQGGQDILSLMGQMMKPRKTEITDKLRQEVNKVVNRYLDEGVAELVPGVLFIDEVHMLDVECFSYLNRALESSLSPIVIFATNRGICNVRGTDMTSPHGIPVDLLDRLVIIRTQTYGPAEMIQILAVRAQVEELVVDEESLAFLGEIGQRSSLRHAVQLLSPASIVAKLKGRDKISKTDIDEVSSLYLDAKSSAKLLGEQQEKYIS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1319 455 Pfam TIP49 P-loop domain 14 365 IPR010339 GO:0005524
Lal1g1319 455 CDD AAA 40 130 - -
Lal1g1319 455 Gene3D - 365 455 - -
Lal1g1319 455 Pfam TIP49 AAA-lid domain 373 438 IPR041048 -
Lal1g1319 455 PANTHER RUVB-LIKE HELICASE 1 455 - -
Lal1g1319 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 434 IPR027417 -
Lal1g1319 455 SMART AAA_5 62 364 IPR003593 -
Lal1g1319 455 Gene3D - 11 362 IPR027417 -
Lal1g1319 455 Gene3D - 119 244 IPR042487 -
Lal1g1319 455 PANTHER RUVB-RELATED REPTIN AND PONTIN 1 455 IPR027238 GO:0008094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1319 Lal-Chr1 14926056 14930402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1319 K04499 - gmx:102659805 822.002