Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1314 ATGAACATGAAGGTTGGTAAAACATCATTGATGAACCAGTATGTGAATCATAAGTTTAGTAATCAGTATAAGGCTACCATAGGTGCTGATTTTCTTACCAAGGAAGTTCAGTTTGAAGATAGGTTGTTCACTTTGCAGATTTGGGACACTGCTGGTCAAGAGCGGTTTCAGAGTCTCGGGGTGGCTTTCTACCGTGGTGCAGATTGTTGTGTCCTTGTTTATGATGTAAATGTTCTGAAATCTTTTGAAAACCTTAATCATTGGCGAGAAGAATTTCTTATTCAGGCTAGTCCATCTGACCCAGAAAACTTTCCATTTGTTGTATTGGGAAACAAAGTAGATGTTGATGGTGGTAATAGTAGAGTTATTTCTAAGAAGAAAGCAAAGGCATGGTGTGCTTCCAAGGGAAACATTCCATACTTTGAAACCTCTGCAAAAGAAGGGTTTAATGTTGAAGCTGCTTTCCAGTGTATAGCAAAAAATGCACTCAAGAATGAGCCTGAAGAAGAAATGTACCTGCCTGATACAATTGATATGGGTGGTGGTGGAAGACAACAAAGATCTACAGGTTGTGAATGTTGA 582 0.39 MNMKVGKTSLMNQYVNHKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFENLNHWREEFLIQASPSDPENFPFVVLGNKVDVDGGNSRVISKKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLPDTIDMGGGGRQQRSTGCEC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1314 193 TIGRFAM small_GTP: small GTP-binding protein domain 4 158 IPR005225 GO:0005525
Lal1g1314 193 SMART ran_sub_2 2 187 - -
Lal1g1314 193 SMART rho_sub_3 4 165 IPR001806 GO:0003924|GO:0005525
Lal1g1314 193 PANTHER RAB FAMILY 4 193 - -
Lal1g1314 193 PANTHER BNAA01G26470D PROTEIN 4 193 - -
Lal1g1314 193 CDD Rab7 5 168 - -
Lal1g1314 193 ProSiteProfiles small GTPase Rho family profile. 1 162 - -
Lal1g1314 193 ProSiteProfiles small GTPase Ras family profile. 1 193 IPR001806 GO:0003924|GO:0005525
Lal1g1314 193 SMART ras_sub_4 4 165 - -
Lal1g1314 193 SMART rab_sub_5 3 165 - -
Lal1g1314 193 ProSiteProfiles small GTPase Rab1 family profile. 1 193 - -
Lal1g1314 193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 172 IPR027417 -
Lal1g1314 193 Gene3D - 2 176 IPR027417 -
Lal1g1314 193 PRINTS Transforming protein P21 ras signature 18 34 - -
Lal1g1314 193 PRINTS Transforming protein P21 ras signature 36 58 - -
Lal1g1314 193 PRINTS Transforming protein P21 ras signature 102 115 - -
Lal1g1314 193 PRINTS Transforming protein P21 ras signature 140 162 - -
Lal1g1314 193 Pfam Ras family 3 163 IPR001806 GO:0003924|GO:0005525
Lal1g1314 193 MobiDBLite consensus disorder prediction 174 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1314 Lal-Chr1 14812250 14817353 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1314 K07897 - gmx:100783389 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1314 1 14812250 14817353 Lal1g1314 1 14812250 14817353 ECH