Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1261 ATGATCCTTTTCTCTGTGAGACCTTTCTTCACTTTTCTCATCATCCCTCTTTCTATTCTCCTCTTTCTCGCATTTCTATTCCTTCCTTCTTCCCCTTTCTCACAAAATCAACAACCTTCACTAGGGGAAGTTGATATATGGAGTGTGAAGAGACTTGTGGAATGGAAACCTTGCAATTGGTGGCTCCAAGGTCATAAAAAAGCTCTGCCGTTAGAACCAAATGGATATATCAGAGTGGATTGTTATGGAGGCCTCAACCAGATGCGAAGAGATTTTTGTGATGGTGTGGGCATTGCACGTCTGTTAAATGCAACCCTTGTGCTGCCAAAGTTTGAAGTAGCTACATATTGGAATGAAACAAGTGGTTTTGCAGATGTATATGACGTAGACTACTTTATTCAAAATATGAATGGCTTCGTCAAAGTTGTCAAAGAGTTACCACCAGAGATTGCATCAAAAGAACCTGTCCGAGTGGACTGTAGCAAACGAAAAGGCCAATTTGATTATGTTGAAAGTATTCTTCCATCTCTTTTAGAACACAAATACATTTCAATCACACCAGCAATGTCCCAAAGACGAGACCGATATCCTTTGTATGCAAAAGCTGCTCTATGTCAAGCTTGTTACAAGGCTTTACGTCTAAAAAGATCCTTGGAAATGAAAGCATCAAAGCTTCTAGATGCAATACCTAAACCCTTTTTGTCTCTTCATCTTCGTTTCGAGCCTGACATGGTTGCTTACAGCCAGTGCGAGTACCCTGGCCTTTCTCCAGCCTCCATGAAAGCCGTAGAAGTGGCACATGGGCAACTAATGGCGGAGAGAAAACCATGGACCGGAGAGGTAGCTCGCATTTGGAGACAACGAGGGAAATGTCCCCTTACACCTAACGAGACAGCTTTAATACTCCAAGCTCTTTCCGTTTCGTCAACCACAAACATATACCTTGCGGCCGGAGATGGTTTGATGGAAATCGAAGGGTTAACGTATACCTACTCAAACATATTCACAAAGTCTAGTCTTCTCAGTGGTGAAGAGTTCACAAGCATGCATGGTAATACAAAAGCTGCTTTGGACTATTATGTATCTATCAATAGTGATTCATATATTGCTACATATTTTGGGAACATGGATAAGATGGTTGCAGCAATGAGAGCCTTCAAAGGGTTGTATAAGACACTATTTTTGAGTAGGAGAGGTTTTGCAGAATTAACCTCACAGGGTTTGAAGGGAAAGGAATTGATGCAAGCCTTGTGGATGCTTCACAGAGATGATTTTGTCATGGGAAGAGGTTCTGCTCTATCTGAATGTTTTTGTGAATTCAAGTTGTGA 1329 0.4146 MILFSVRPFFTFLIIPLSILLFLAFLFLPSSPFSQNQQPSLGEVDIWSVKRLVEWKPCNWWLQGHKKALPLEPNGYIRVDCYGGLNQMRRDFCDGVGIARLLNATLVLPKFEVATYWNETSGFADVYDVDYFIQNMNGFVKVVKELPPEIASKEPVRVDCSKRKGQFDYVESILPSLLEHKYISITPAMSQRRDRYPLYAKAALCQACYKALRLKRSLEMKASKLLDAIPKPFLSLHLRFEPDMVAYSQCEYPGLSPASMKAVEVAHGQLMAERKPWTGEVARIWRQRGKCPLTPNETALILQALSVSSTTNIYLAAGDGLMEIEGLTYTYSNIFTKSSLLSGEEFTSMHGNTKAALDYYVSINSDSYIATYFGNMDKMVAAMRAFKGLYKTLFLSRRGFAELTSQGLKGKELMQALWMLHRDDFVMGRGSALSECFCEFKL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1261 442 PANTHER OS02G0726500 PROTEIN-RELATED 4 441 - -
Lal1g1261 442 PANTHER O-FUCOSYLTRANSFERASE 13 4 441 - -
Lal1g1261 442 PIRSF UCP009360 28 440 IPR024709 -
Lal1g1261 442 CDD O-FucT_plant 76 392 IPR024709 -
Lal1g1261 442 Pfam GDP-fucose protein O-fucosyltransferase 76 386 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1261 Lal-Chr1 13862676 13865930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1261 70 412 Miscellaneous Gene Families AT1G22460 36.056 9.52e-58 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1261 - - gmx:100801207 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1261 1 13862676 13865930 Lal1g1261 1 13862676 13865930 ECH