Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1253 ATGGCCCTTATAACCTCTCAGCCAAAAAACCCAATTCTCAATCACTTTACCACCTTTCACAGTGCAATTCCAAGGTTGAATAAATCTGTTATTGGTCTTGGATCATTCTCTAACAATGCAAAACTCATCAAAGTTTCAAACTTTAACTCAAACTCAACCAAATTCTCCATAAAAAACAACCCATTTAGCCTTAAAGTCATAGCCACCAATGCAGAATTTTCAGAAACTTTTGAGCCACAAAAACAAGATAGGAATAATAATTTAAAGAAACCCAGAAAGATTTTGTTCTCTGATGTGGAAATTAGAAGAGAAAAAGAAGTGTTCTTTGGAAGAAAATGGAGTACAAAGGAGATTGGAACTTGTGTTATTGTGTTATCAATGCATGTACTTAGTCTTTTTGCACCATTTTATTTCAATTGGTCAGCATTTTGGGTTGCTGTGTCACTTTATGTTGTGACTGGTCTTCTTGGTATAACACTTTCTTTTCATAGGAATCTGTCTCATAAGAGTTTTAAGGTTCCTAAGTGGCTTGAATATTTCTTTGCCTATTGTGGAGTTCTTGCTCTTCAGGGGAACCCAATTGATTGGGTGAGCACACATAGGTATCACCACCAGTTTTGTGACTCTGATAGAGACCCACATACCCCTACTGAAGGATTCTGGTACAGCCATATCACTTGGCTCTTTGATACCAATTCTGTGGTCCAAAAGTGTGGAGAAGCAAACAATGTTGGTGATTTAGAGAATCAATTGTTCTATAGATTTATGAGAAGCAGTTATATTTTCCATCCACTTGCTTTGGGAGCACTTCTATATGCTATTGGAGGATTTCCTTTTCTTGTTTGGGGAGTGGGTGTGAGGATTGTTTGGGTATACCATATAACTTGGCTGGTAAATTCAGTTTGCCATGTTTGGGGTACTCAATCTTGGAACACAGGGGACTTATCAAGAAATAATTGGTGGGTGTCATTATTTGCATTTGGAGAAGGTTGGCACAATAATCACCATGCTTTTGAGTATTCAGCAAGACATGGCTTAGAGTGGTGGGAATTAGACATGACTTGGTATGTAGTGAGATTTCTTCAAGCTATTGGGTTAGCCACTGAGGTTAAGTTACCTACTCAAAATCACAAGCAAAGAATGGCATTCAATAATGGTGCAATAGCTACATGA 1173 0.3777 MALITSQPKNPILNHFTTFHSAIPRLNKSVIGLGSFSNNAKLIKVSNFNSNSTKFSIKNNPFSLKVIATNAEFSETFEPQKQDRNNNLKKPRKILFSDVEIRREKEVFFGRKWSTKEIGTCVIVLSMHVLSLFAPFYFNWSAFWVAVSLYVVTGLLGITLSFHRNLSHKSFKVPKWLEYFFAYCGVLALQGNPIDWVSTHRYHHQFCDSDRDPHTPTEGFWYSHITWLFDTNSVVQKCGEANNVGDLENQLFYRFMRSSYIFHPLALGALLYAIGGFPFLVWGVGVRIVWVYHITWLVNSVCHVWGTQSWNTGDLSRNNWWVSLFAFGEGWHNNHHAFEYSARHGLEWWELDMTWYVVRFLQAIGLATEVKLPTQNHKQRMAFNNGAIAT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1253 390 PRINTS Fatty acid desaturase family 1 signature 140 162 IPR015876 GO:0016717
Lal1g1253 390 PRINTS Fatty acid desaturase family 1 signature 163 183 IPR015876 GO:0016717
Lal1g1253 390 PRINTS Fatty acid desaturase family 1 signature 200 229 IPR015876 GO:0016717
Lal1g1253 390 PRINTS Fatty acid desaturase family 1 signature 285 306 IPR015876 GO:0016717
Lal1g1253 390 PRINTS Fatty acid desaturase family 1 signature 328 342 IPR015876 GO:0016717
Lal1g1253 390 CDD Delta9-FADS-like 139 371 IPR015876 GO:0016717
Lal1g1253 390 PANTHER ACYL-COA DESATURASE 91 385 IPR015876 GO:0016717
Lal1g1253 390 PANTHER BNAC05G37460D PROTEIN 91 385 - -
Lal1g1253 390 Pfam Fatty acid desaturase 140 359 IPR005804 GO:0006629
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1253 1 385 Lipid Metabolism Gene Families AT3G15850 60.358 3.09e-171 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1253 K20416 - gmx:100527024 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1253 1 13792801 13797427 Lal1g1253 1 13792801 13797427 ECH