Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lal1g1236 | ATGGATTGGTTCTCATGGCTTTCAAAAACTAACCTTGAACCAACCCTAGTTTATGAATATGGCCTTGCTTTTTCTCACAATGAGCTTGAAGAAGAAGACATAGTTTACTTCAACCATGAGTTTCTCCAAAGCATGGGAATCTCCATAGCAAAGCATAGGTTAGAGATACTAAAGCTTTCAAAGAAATACAAAGGATCAAAGAGGTCATCATCAATTCAAGTTACAAGACTCATAGTGGCAATCAAGAAAACAAAGAGGTGTTTGGCTAATTATATTAGAAGGACAATAGTTAGATGCGAAGATTCAACGGCGCTTGTTGTAGTGCCATCATCATTTTCATCGTCGTCGTCAAGACCCAGATGGAATAAAAGTTGTGTGATGAAAAGGAACAAAAAGTTGATGGTCGATAATAATAAACAAGAGAGGCTATTACTCACAAATGGGTCAAGCCCTAGTCTTGATGTTTTTTCAAGTCCAATGATGTATCATTTCAAGAAGGAGGAAAAGATAGATAGTGGTTATTGGTCATCTTCTATTGAAGAATTCAGGTGGGATACCATGTTTCAAGATCTAAAACCAAACTAA | 585 | 0.3658 | MDWFSWLSKTNLEPTLVYEYGLAFSHNELEEEDIVYFNHEFLQSMGISIAKHRLEILKLSKKYKGSKRSSSIQVTRLIVAIKKTKRCLANYIRRTIVRCEDSTALVVVPSSFSSSSSRPRWNKSCVMKRNKKLMVDNNKQERLLLTNGSSPSLDVFSSPMMYHFKKEEKIDSGYWSSSIEEFRWDTMFQDLKPN | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lal1g1236 | 194 | CDD | SAM_superfamily | 2 | 62 | - | - | |
| Lal1g1236 | 194 | Pfam | SAM domain (Sterile alpha motif) | 19 | 58 | IPR001660 | GO:0005515 | |
| Lal1g1236 | 194 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 194 | - | - | |
| Lal1g1236 | 194 | PANTHER | OSJNBA0033G05.11 PROTEIN | 1 | 194 | - | - | |
| Lal1g1236 | 194 | SUPERFAMILY | SAM/Pointed domain | 5 | 65 | IPR013761 | - | |
| Lal1g1236 | 194 | Gene3D | - | 1 | 70 | IPR013761 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lal1g1236 | Lal-Chr1 | 13671678 | 13672262 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lal1g1236 | - | - | pvu:PHAVU_010G157800g | 224.942 |
Event-related genes