Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1230 ATGCGACGTTCTTCTAATTCTTCCAAAAAGACGGGTCAATCCAATTCCGATCTTTACCGTTCTGCCTCGAGCAAAGCAAGCTCAAAGGAATCAGAACGTATTGATAGTCTATTTTATTCCTATGCCAATGGATCTACTGGGTTGATTGACCCAGAAGGCATTGAAACACTTTGTGCTGATATTGAGGTGGATCATACTGATGTAAGAATCTTGATGCTTGCATGGAAAATGAAATCTGAGGAGCAAGGATATTTTACCTTGGATGAGTGGAGGAGAGGCATGAAAGCACTAAGAGCTGATACAGTAAGCAAATTGAAGAAGGCACTTCCAGACTTAGAAAAGGAGGTCATGAGGCCAACAAATTTTGCAGATTTCTATTCTTTTGCTTTCCAGTATTGTTTAACAGAGGAGAAACAGAAAAGCATTGATATAGAGAGCATCTGTCAATTACTAAATCTTGTTTTGGGTTCAACATTTTCAGCCCAAGTTAACTTATTTGTGGAATATTTGAAGTCTCAAAATGATTACAAGGTCATAAACATGGATCAATGGATGGGATTTTTCAGGTTTTGCAATGAGATTACATTTCCAACCCTTAATGAATATGATCCAGAACTTGCATGGCCCTTGATCCTCGACAATTTTGTCGAATGGATACGAGAAAAGCAAATTTGA 675 0.3807 MRRSSNSSKKTGQSNSDLYRSASSKASSKESERIDSLFYSYANGSTGLIDPEGIETLCADIEVDHTDVRILMLAWKMKSEEQGYFTLDEWRRGMKALRADTVSKLKKALPDLEKEVMRPTNFADFYSFAFQYCLTEEKQKSIDIESICQLLNLVLGSTFSAQVNLFVEYLKSQNDYKVINMDQWMGFFRFCNEITFPTLNEYDPELAWPLILDNFVEWIREKQI 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1230 224 MobiDBLite consensus disorder prediction 7 25 - -
Lal1g1230 224 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 1 223 - -
Lal1g1230 224 Gene3D Cullin, PONY binding domain 119 224 IPR042460 -
Lal1g1230 224 SUPERFAMILY EF-hand 28 192 IPR011992 -
Lal1g1230 224 Gene3D - 27 117 - -
Lal1g1230 224 MobiDBLite consensus disorder prediction 1 28 - -
Lal1g1230 224 Pfam Cullin binding 104 218 IPR005176 -
Lal1g1230 224 ProSiteProfiles DCUN1 domain profile. 29 220 IPR005176 -
Lal1g1230 224 PANTHER RP42 RELATED 1 223 IPR014764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1230 Lal-Chr1 13570782 13574810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1230 K17824 - gmx:100776788 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1230 1 13570782 13574810 Lal1g1230 1 13570782 13574810 ECH
Lal1g1230 1 13570782 13574810 Lal18g0049 18 350483 356119 LSH