Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1182 ATGGGGAAGTCAGTGAAGAAGAGTAGCCCAGAGATGGTACACTCACCACTTGTCACTTATGCTTCCATGATTTCTCTTCTCTCTCTTTGTCCTCCCTTCGTCATTCTTCTATGGTATACGATGACTTCTTCTGATGGATCCATCCTACAAACTTTCCATTACTTATACCATAATGGTCTTCAAGGATTCATTAACATTTGGCCTAAACCCACTCTCACTGCTTTCAAATTAATCTCACTTTTTGCTGCTTTTCAAGCTTCACTTCAACTTCTTCTACCTTCTCACACTGTCTATGGTCCCATCTCTCCCAACGGAAACATACCTATCTACAAGGCTAATGGTGTCTTTGCATATTTTGTTACCTTACTTACTTATCTCTCCCTTTGGTTCTTTCGGATATTCAACCCTTCTATTGTTTATGATCATTTGGGAGAGATTTTTTCATCACTCATCTTTGGGAGTTTGCTCTTTTGTGTTTTCTTAAACATCAAAGGTCATTTGGCACCATCTTCTTCTGATTCTGGATCTACTGGCAACTTTATCATTGATTTTTACTGGGGTATGGAGCTCTATCCACGCATCGGAAAACATTTTGACATAAAAGTCTTCACAAACTGCAGATTTGGAATGATGGCATGGGCTGTTCTTACACTCACTTATTGTATAAAGCAGTATGAAGCAAACGGGAAAGTGTCCGACTCAATGCTTGTAAATACTATACTAACGCTGGTGTATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACTATGGACATTGCACATGATCGAGCTGGGTTTTACATTTGCTGGGGCTGCTTGGTGTGGGTTCCATCAGTGTATACATCTCCTGGAATGTACCTTGTTAATCATCCTGTACATCTTGGCACTGGGCTGGCACTCTCTATTTTAGTGTCTGGCATTCTTTGCATATACATCAACTATGATTGTGACAGGCAAAGACAAGAATTTCGTAGGACAAACGGAAAATGCAAAGTCTGGGGGAAAGCTCCATCAAAGATAGACGCCTCATATACTACTACTTCTGGGGAAACAAAAAGAAGCCTTCTTTTAACCTCTGGATGGTGGGGATTAGCTCGTCATTTTCATTATGTCCCGGAAATTCTAGCCGCTTTCTTCTGGACAGTTCCAGCTCTTTTCAATCATTTTTTTCCTTACTTCTATGTGATATTTCTTACCGTCCTTCTTTTCGATCGAGCAAAAAGGGATGATGATCGATGCAGATCCAAGTATGGCAAGTATTGGAAACTGTATTGTGATAAGGTTCCTTACAGAGTCATTCCAGGAATCTACTGA 1323 0.4044 MGKSVKKSSPEMVHSPLVTYASMISLLSLCPPFVILLWYTMTSSDGSILQTFHYLYHNGLQGFINIWPKPTLTAFKLISLFAAFQASLQLLLPSHTVYGPISPNGNIPIYKANGVFAYFVTLLTYLSLWFFRIFNPSIVYDHLGEIFSSLIFGSLLFCVFLNIKGHLAPSSSDSGSTGNFIIDFYWGMELYPRIGKHFDIKVFTNCRFGMMAWAVLTLTYCIKQYEANGKVSDSMLVNTILTLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTGLALSILVSGILCIYINYDCDRQRQEFRRTNGKCKVWGKAPSKIDASYTTTSGETKRSLLLTSGWWGLARHFHYVPEILAAFFWTVPALFNHFFPYFYVIFLTVLLFDRAKRDDDRCRSKYGKYWKLYCDKVPYRVIPGIY 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1182 440 ProSitePatterns Sterol reductase family signature 2. 404 427 IPR018083 GO:0016628
Lal1g1182 440 Gene3D - 208 439 - -
Lal1g1182 440 PANTHER 7-DEHYDROCHOLESTEROL REDUCTASE 11 440 - -
Lal1g1182 440 Pfam Ergosterol biosynthesis ERG4/ERG24 family 55 440 IPR001171 GO:0016020|GO:0016126|GO:0016628
Lal1g1182 440 PANTHER DELTA(14)-STEROL REDUCTASE 11 440 - -
Lal1g1182 440 ProSitePatterns Sterol reductase family signature 1. 178 193 IPR018083 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1182 Lal-Chr1 13060391 13064277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1182 11 440 Miscellaneous Gene Families AT1G50430 83.023 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1182 K00213 - gmx:102659420 790.03