Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1174 ATGATGATGAGTATGAGTATGAGAAGCAGCATCAGCGGTTTGTCTATCTTTAAAATACATTGCCTTTCATCCTCCGATGATGATGCTCAATATTCCAACTCAACAACAAGGCGACGCGGTTTTGGAGATAACAACAACAACAACAACAACATCCCTATTAAGAAGAGGAGCAAGGTATCAACAACTAAACCTCTCCTTGTTGATCTTGACTTTGACCAACGTCTTCAAGCTGTTACTAGGCAACTATTCCTCTTTTCTTCTTCTTTAGTATATATACTCAGCTCTGCACTTGAACAAAAGAAATCACAGCAGCAGCAAAATCAATTTGGAGCAATTGACTATGATACCCCCATCACCTCTTCTCCTCCCAACAACAACAGCAAGGAAATTGGCTTGGCTACTAAGATTGGAGTTGGTGTAGCTGTCCTCCTCTTTGGTCTCGTTTTTACTTTAGGAGATTTTATTCCTTCACAAAGTCCTAATGAAGACAGTCCTGTCCTCAATTTATCAGTGGAGGATAAAGCTAAGCTTCAGAGTAGGCTTCAGGAATTTGAAGCAACATTAAGTAACTCCCCAAGAGATCCAACTGCTCTTGAAGGGGCTGCAGTAACTTTCGCACAACTAGGAGAATATGCAAAAGCTGCTTCTCTACTTAATGATTTGACAAAGGAAAAACCAAATGATGCTGATGTTTTGCGTTTACTTGGTGAAGTAAACTATGAACTCAAGGACTATGAAGGGAGTGTTGCTGCATATAAAACTTCAGCAATGGCGTCTAAAGATATTGAGTTTGAAGTTCTGCGTGGCTTGACCAATTCATTACTTGCTGCGGAAAAGCCAGACGAGGCAGTTCAATTTCTTTTATCGTGTCGTGAACGTTTGAGTTCAGAAATCCTGAGCAAAAAACATGATAACAGCCCAACAGACTCACAGAAGCTGGATCCAATCCAAGTTGAATTACTTCTTGGAAAAGCTTACTCAGATTGGGGTCATGTCAGTGATGCTGTAGCTGTTTATGACCAGCTCATATCTACTCATCCGGATGATTTTCGTGGTTATTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAACATTGGAGATGCAGAGAGAATGTTCATACAAGCTCGGTTCTTTGCACCAGATAAAGCTAAAGTACTTGTGGACCGCTATTCAAGATAA 1182 0.4027 MMMSMSMRSSISGLSIFKIHCLSSSDDDAQYSNSTTRRRGFGDNNNNNNNIPIKKRSKVSTTKPLLVDLDFDQRLQAVTRQLFLFSSSLVYILSSALEQKKSQQQQNQFGAIDYDTPITSSPPNNNSKEIGLATKIGVGVAVLLFGLVFTLGDFIPSQSPNEDSPVLNLSVEDKAKLQSRLQEFEATLSNSPRDPTALEGAAVTFAQLGEYAKAASLLNDLTKEKPNDADVLRLLGEVNYELKDYEGSVAAYKTSAMASKDIEFEVLRGLTNSLLAAEKPDEAVQFLLSCRERLSSEILSKKHDNSPTDSQKLDPIQVELLLGKAYSDWGHVSDAVAVYDQLISTHPDDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKVLVDRYSR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1174 393 ProSiteProfiles TPR repeat profile. 316 349 IPR019734 GO:0005515
Lal1g1174 393 SMART tpr_5 316 349 IPR019734 GO:0005515
Lal1g1174 393 SMART tpr_5 195 228 IPR019734 GO:0005515
Lal1g1174 393 SMART tpr_5 264 297 IPR019734 GO:0005515
Lal1g1174 393 SMART tpr_5 350 383 IPR019734 GO:0005515
Lal1g1174 393 SMART tpr_5 229 262 IPR019734 GO:0005515
Lal1g1174 393 SUPERFAMILY TPR-like 183 382 IPR011990 GO:0005515
Lal1g1174 393 Pfam Tetratricopeptide repeat 203 254 - -
Lal1g1174 393 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 35 393 - -
Lal1g1174 393 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 35 393 - -
Lal1g1174 393 MobiDBLite consensus disorder prediction 27 55 - -
Lal1g1174 393 Gene3D Tetratricopeptide repeat domain 169 391 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1174 - - lang:109357276 579.711