Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0887 ATGAAGCAAACATCATCACCACACCACAACCAGAAATCTAGGGCTCAATTATGTTGTTTGGATTGGTATTCTTGCATACAACTATTCTGGGCAAAAGTGGTGATGCATAAATGGCTTAATATGGGAACCAATGAGTCTGATTATAGTGCTGACCCTCATGATGATGATGATCCTGAAAGTGGTTCTGACAATGAAGAGTGGGGAGGACAGTCACAGTTTATGGACAATAGGGGCAATGAAGCTCCACTCGAATCAAATGAATTTCTTCCAAGGTTAAGGAGGCAAATGTCATCAACTTATAGATCCCAGTATATAAACTCGAAGGAACTGAAGATATGTGTTGGGACATGGAATGTTGGAGGAAAACTTCCACCTGATGATCTAGATATTGATAATTGGTTAGGTGTCAACGAACCAGCTGACATCTATGTCCTTGGTCTTCAAGAGATTGTACCATTAAACCCTGGTAACATTTTTGGTGCTGAAGATACTCGTCCTGTTCCAAAATGGGAAAATATTATCAGGGAAACGCTGAATAGAGTTCGGCCTTCAGCATCAAAGATAAAATCCTTCAGTGATCCCCCATCTCCATCAAAATTTAAGCTACAAGATGATGTCTCAGATATAGAAGAAGAAATGTTACTTGAAAGTGATAGTGACATTGGTGAGGAATTTCATCCTTTGGGTGAATATGTTTATGATGGAGGTACTAATGGAACAATCACAGGTGGCATTATTAATACACATTTATCGGCTATCGATGCTGTTGATATTCCCATTTCTGGTGTGCCAGTTGAACCTGGTGTCCAGAGACAGTTTTCTTTTCCAAAGAAGTTTGATAGGCTGCATTCTTTCCACACTGAATGTTCCTCTGGAAGCATGGACAAATCATTTTCCCAACAAACCACTAAAGTAACCAGAATGCTTAGTGGGTCTGAGTTTATTGGTTTGAGCTGGCCAGAGCCGCCGCTAAATCTTTTATCTCAGCGAGTATCGGAGAGACCAACTTTTAAATCCGTCAAATCCTTTGAATCATTTAAGTCTTTAAAAACATACAATTCTTTCAAGTCAATTATGAATGACATGCTAGGGATGGTTTTGCTTCCTGAAACTGACCTTGAAGCTTTAATGAAGCGGAAGAGAAGATCATCATATGTAAGGATTGTGAGCAAGCAGATGGTTGGGATTTTCATCACTGTATGGGTTCGACGAAGCTTGCGTAAGCATATTCAGAATGTAAAAGTGTCAACTGTTGGCATTGGTATTATGGGCTACATTGGTAACAAGCCGTCCAGTGCCCGAAGTCTCTTCACAGTTGGACTCAGACACTGTAGATCGGACATCCCACCCAGCACCGCCACCAAAGATGTCACCTTTTTCGAGGATCATCCACATTTTTCTGCTATAGGCCTCGAGTTTGTCTCCCAGGGATCAATATCTGTCAGCATGTCCATATATCAGACACTTTTTTGTTTCATATGTACCCACCTTACGTCGGGTGAAAAGGAAGGAGACGAACATAAAAGGAATTCTGATGTTAAAGAAATACTACGGAGAACTCATTTTCGTTCAGTTTCTTATATTGGACTTCCCAAAAGAATCATTGATCATGAAAGAATAATTTGGTTCGGTGATCTTAACTATCGTATCGACTTACCAAATGTGGAAACAAGAGCTCTCGTCTCAAAGAAGCTTTGGTCAAAATTGGTTGAAAAAGACCAGCTTATTCGAGAACTCAAGAGCGGTGGTGTGTTTGGAGGATGGTCAGAAGGCATTTTAAACTTCCCACCAACATATAAATATGAGATCAATTCAGATAAGTACCACGGAGAGGAGTTCAGGGTTAAGAAGCGTTCACCAGCATGGTGTGACCGTATTCTTTCATATGGCAATGGAATGATATTACTGAGCTACAAAAGGGCTGAGCTCAAATTATCAGATCACAGACCTGTGTGCGCCACATATATGGCTAAGGTGGAGGAATTCTGTCCTAGGACACTTCAACGAGCCCTAACGTTCACCGATGCAGAGGGACACAATGAGTTCTGA 2049 0.4095 MKQTSSPHHNQKSRAQLCCLDWYSCIQLFWAKVVMHKWLNMGTNESDYSADPHDDDDPESGSDNEEWGGQSQFMDNRGNEAPLESNEFLPRLRRQMSSTYRSQYINSKELKICVGTWNVGGKLPPDDLDIDNWLGVNEPADIYVLGLQEIVPLNPGNIFGAEDTRPVPKWENIIRETLNRVRPSASKIKSFSDPPSPSKFKLQDDVSDIEEEMLLESDSDIGEEFHPLGEYVYDGGTNGTITGGIINTHLSAIDAVDIPISGVPVEPGVQRQFSFPKKFDRLHSFHTECSSGSMDKSFSQQTTKVTRMLSGSEFIGLSWPEPPLNLLSQRVSERPTFKSVKSFESFKSLKTYNSFKSIMNDMLGMVLLPETDLEALMKRKRRSSYVRIVSKQMVGIFITVWVRRSLRKHIQNVKVSTVGIGIMGYIGNKPSSARSLFTVGLRHCRSDIPPSTATKDVTFFEDHPHFSAIGLEFVSQGSISVSMSIYQTLFCFICTHLTSGEKEGDEHKRNSDVKEILRRTHFRSVSYIGLPKRIIDHERIIWFGDLNYRIDLPNVETRALVSKKLWSKLVEKDQLIRELKSGGVFGGWSEGILNFPPTYKYEINSDKYHGEEFRVKKRSPAWCDRILSYGNGMILLSYKRAELKLSDHRPVCATYMAKVEEFCPRTLQRALTFTDAEGHNEF 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0887 682 MobiDBLite consensus disorder prediction 64 79 - -
Lal1g0887 682 MobiDBLite consensus disorder prediction 44 88 - -
Lal1g0887 682 PANTHER TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 476 681 - -
Lal1g0887 682 PANTHER TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 19 435 - -
Lal1g0887 682 SUPERFAMILY DNase I-like 91 661 IPR036691 -
Lal1g0887 682 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 19 435 IPR045849 GO:0004445|GO:0046855
Lal1g0887 682 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 476 681 IPR045849 GO:0004445|GO:0046855
Lal1g0887 682 Gene3D Endonuclease/exonuclease/phosphatase 90 193 IPR036691 -
Lal1g0887 682 Gene3D Endonuclease/exonuclease/phosphatase 337 680 IPR036691 -
Lal1g0887 682 SMART i5p_5 285 663 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0887 Lal-Chr1 6316049 6327614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0887 383 659 Acyl Lipid Metabolism Gene Families AT1G65580 27.586 1.59e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0887 - - gmx:100811025 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0887 1 6316049 6327614 Lal1g0887 1 6316049 6327614 ECH
Lal2g1010 2 6902704 6911304 Lal1g0887 1 6316049 6327614 LSH