Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0875 ATGGCAGCGAAACGTGTGTTTGAAGCATGGAAAGGAAGTAATAAATTCGTATTTGGAGGGAGGTTGATATTTGGGCCTGATGCTAGGTCACTGGTTTTCACCTTGTTTCTGATTATACTTCCAGTCATCATCTTTTGTGTATTCGTGGGGAGGCATCTTCGGCATGAATTTTCTTCATACAATGCAGGATATGCTATTTTGGTGGTGACAATTGTCTTTAATATTTATGTACTGGTTCTTCTCTTTCTTACATCGTCGCGTGATCCGGGCATTATTCCAAGGAACTTACATCCACCAGAGGAAGAATTTCGTTATGACTCTTCAGTTTCTATGGATGTTGGGGGACGACAAACACCAAGCCTTCAGTTCCCTCGATTTAAAGAAGTAATGGTCAATGGCCATCCTGTAAAGGTGAAGTATTGTGACACGTGTATGCTGTATCGCCCTCCTCGTTGCTCGCATTGCTCCATTTGCAACAACTGTGTTGAGCGATTTGATCACCATTGCCCTTGGGTGGGCCAATGCATTGGAATGAGGAACTACCGTTACTTCTTTATGTTCGTTTCGTCAGCAACTATTCTATGTATCTACGTGTTTTCGTTCTCAGCATTTTACATCAAGGTTCTGATGGATCGTGAAGGCACAGTTTGGAAGGCAATGAAAGAATCCCCTTCATCCGTTATACTAATGGCTTATTGTTTTATCTCTCTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTACCTTATTGGCACAAATCAGTGGGAGGCTGACGCCACCTATTGGGATAAAGGCTTGGTTGTTATTGTTGTGATTCATTTGTCGGTCCAGACCACCTATGAAAATTTTCGCTACAGATCGGATGACAGGATCAATGTTTATAACCGGGGTTGTTTAAATAACTTTCTGGAAGTCTTTTGTACACAAGTAAAGCCCTCAAGGAACAATTTCCGTGCTTTTGTCCAAGAGGAGGTACCAAGGGCACCGGCTCCAGTCACTGCTCGCGAACCTGAATCAGATTTGGTTGGAGATACCCGTTCTAAGGTTGAAGATGATCTAGACATTGGTGAAGACCTGTTGAAGATATCTCAGCGTCGGAATATCGAAGAAATTGATGAGGACATTCGAAGCAGAGGGAGCAATGGACCACCCCATAATATTATATCTGACATTGATTCAGTTTTGGGCTCAGGTCGAGCTCCAACGATTCGGTCTGAAGCAAGGCACTCGAGTTGGGGAAGAAGTGGAAGCTGGGAAATCGGACAGGAAATCCTTGCCAGTTCGAATGTCAGCGAAAGAAGCTATGTTGCTTCGAAGGAGGTGCGCCAATGA 1335 0.4382 MAAKRVFEAWKGSNKFVFGGRLIFGPDARSLVFTLFLIILPVIIFCVFVGRHLRHEFSSYNAGYAILVVTIVFNIYVLVLLFLTSSRDPGIIPRNLHPPEEEFRYDSSVSMDVGGRQTPSLQFPRFKEVMVNGHPVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGMRNYRYFFMFVSSATILCIYVFSFSAFYIKVLMDREGTVWKAMKESPSSVILMAYCFISLWFVGGLTGFHLYLIGTNQWEADATYWDKGLVVIVVIHLSVQTTYENFRYRSDDRINVYNRGCLNNFLEVFCTQVKPSRNNFRAFVQEEVPRAPAPVTAREPESDLVGDTRSKVEDDLDIGEDLLKISQRRNIEEIDEDIRSRGSNGPPHNIISDIDSVLGSGRAPTIRSEARHSSWGRSGSWEIGQEILASSNVSERSYVASKEVRQ 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0875 444 Pfam DHHC palmitoyltransferase 139 255 IPR001594 GO:0016409
Lal1g0875 444 ProSiteProfiles DHHC domain profile. 139 189 - -
Lal1g0875 444 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 11 256 - -
Lal1g0875 444 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 277 443 - -
Lal1g0875 444 PANTHER S-ACYLTRANSFERASE 277 443 - -
Lal1g0875 444 PANTHER S-ACYLTRANSFERASE 11 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0875 Lal-Chr1 6170332 6177503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g0875 138 182 Lipid Metabolism Gene Families AT4G22750 51.111 3.07e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0875 K16675 - gmx:100795934 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0875 1 6170332 6177503 Lal1g0875 1 6170332 6177503 ECH