Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0864 ATGTCTCAGGTTGTCGCAACAGGATCCATTCAGAGTACCCTTTTGTCCCCCGATTCTGGATCTGCACATGATAGGGCTCAAAAGCTCTTAAAGCTTGCAACTTTTTCTTCCATCGTGTACCCATTAGAAGGGAATAAGTGTTCCAAACTTGGCTCCAGAAGTTTCCACATCAGTGCAAGAAAATCTGCACCCGTTGAAGTTGTTCCCGTGTCACCCAAGGATGATTCAAAGATTGAGGAGCATTTGCAGCACTTGCGTGGTGTGCAGCAATTTGGTGATGCTTCAGCTGGAATGTGGTCAAAGCCCTCGTTTAGGCGAAAGACAAAGATAGTGTGTACTATTGGTCCTTCTACCGATACCAAGGAAATGATTTGGAATCTGGCTGAGGCTGGAATGAATGTGGCTCGCCTCAATATGTCTCATGGAGACCATACTTCTCATCAGAAAGTCATTGACTTGGTTAAAGAGTATAATGCACAAGCCAAGGACAATGTCATTGCAATTATGCTTGACACCAAGGGTCCTGAAGTTAGGAGTGGGGACTTGCCACAACCAATCACATTAAATAGTGGCCAGGAATTTACTTTTACTATTCAGAGAGGTGTTGGAACTGCAGATTGTGTTAGCGTGAACTATGATGATTTCGTCAATGATGTCGAAGCGGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCTTTCTTGGTTAGATCCAAGACACATGATTCTGTGAAATGTGAAGTTATTGATGGAGGAGAACTAAAGTCAAGGCGACATCTAAATGTTAGAGGAAAAAGTGCAACACTGCCTTCAATTACTGAGAAGGATTGGGACGATATCAAATTTGGAGTGGATAACCAAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGATGCTGAAGTAGTTCATGAACTGAAAAATTATTTGAAAAGCTGTGGTGCTGATATACATGTCATAGTAAAAATTGAAAGTGCAGACTCTATACCGAACTTGCATTCAATTATCACTGCATCGGATGGGGCCATGGTTGCTAGAGGAGATCTCGGTGCAGAGCTCCCTATTGAGGAGGTTCCTCTTTTGCAGGAAGAGATAATCATTTTGTGCCGTAGCATGGGAAAGGCTGTTATTGTGGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCGGAGGTGTCAGATATTGCAATCGCTGTTCGAGAAGGTTCTGATGGAATAATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCGCTAAAAGCGGTGAAAGTAATGCACACCGTAGCATTACGGACAGAAGCCACCATACCCGGTGGTCAATTGCCTCCTAATATTGGTCAAGTGTTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCCAACACCCTTGGAACCTCGACTGTTGTCTTTACTAGAACGGGTTTCATGGCTATTCTACTGAGCCACTATCGACCTTCTGGCACCATATTTGCTTTCACCGACGAGAAGAGGGTACAACAGAAGCTGGCTTTGTATCAAGGAGTCTGTCCTATATACATGAAATTCTGCAACGATGCCGAAGCAACTTTCACCAGAGCCTTGGATTTGCTGCAGAAACAAGGAATGGTGAAGGAAGGAGAAGAAGTGGCACTTGTACAAAGTGGCAGACAACCTATATGGAGGTTTCAATCCATTCACAATATCCAGCGACAACGGTCAACGGCTGTGGCAACAGCGGCAGCGACAGTGGTGGTGGAAGCGGGTAGTTATGGGAGTGCTTGTGTTTACAGTGAAATATTTCTTCTATGGGAGTGCATGAGATTAAGAATGAATGGGGATGAAGGAGAATTAAAATAA 1863 0.4402 MSQVVATGSIQSTLLSPDSGSAHDRAQKLLKLATFSSIVYPLEGNKCSKLGSRSFHISARKSAPVEVVPVSPKDDSKIEEHLQHLRGVQQFGDASAGMWSKPSFRRKTKIVCTIGPSTDTKEMIWNLAEAGMNVARLNMSHGDHTSHQKVIDLVKEYNAQAKDNVIAIMLDTKGPEVRSGDLPQPITLNSGQEFTFTIQRGVGTADCVSVNYDDFVNDVEAGDMLLVDGGMMSFLVRSKTHDSVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAEVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIILCRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQLPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRVQQKLALYQGVCPIYMKFCNDAEATFTRALDLLQKQGMVKEGEEVALVQSGRQPIWRFQSIHNIQRQRSTAVATAAATVVVEAGSYGSACVYSEIFLLWECMRLRMNGDEGELK 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0864 620 TIGRFAM pyruv_kin: pyruvate kinase 106 558 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 Gene3D - 108 433 IPR040442 -
Lal1g0864 620 Gene3D - 448 570 IPR036918 -
Lal1g0864 620 SUPERFAMILY PK beta-barrel domain-like 175 266 IPR011037 -
Lal1g0864 620 Pfam Pyruvate kinase, barrel domain 106 441 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 Gene3D - 176 269 IPR015806 GO:0004743|GO:0006096
Lal1g0864 620 ProSitePatterns Pyruvate kinase active site signature. 316 328 IPR018209 GO:0004743|GO:0006096
Lal1g0864 620 PRINTS Pyruvate kinase family signature 164 180 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PRINTS Pyruvate kinase family signature 288 302 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PRINTS Pyruvate kinase family signature 318 344 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PRINTS Pyruvate kinase family signature 345 369 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PRINTS Pyruvate kinase family signature 370 394 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PRINTS Pyruvate kinase family signature 395 413 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PRINTS Pyruvate kinase family signature 414 430 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PANTHER PYRUVATE KINASE 45 573 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lal1g0864 620 PANTHER PLASTIDIAL PYRUVATE KINASE 2 45 573 - -
Lal1g0864 620 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 98 440 IPR015813 GO:0003824
Lal1g0864 620 Pfam Pyruvate kinase, alpha/beta domain 463 555 IPR015795 -
Lal1g0864 620 SUPERFAMILY PK C-terminal domain-like 424 557 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0864 Lal-Chr1 6073824 6084011 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0864 K00873 - gmx:100803036 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0864 1 6073824 6084011 Lal1g0864 1 6073824 6084011 ECH