Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0818 ATGAAGGACTCCAACTCCGATGACTGGCTACCACCAGGTTGGACTGTGGAAGTAAGAGTGAGAAAGAATGGTCAAAGAGACAAGTATTACTTTGCTCCCTTAAGTGGACTGAAACTCAAGTCCAGGGTAGAGGTTTTTCGTCATCTTGACTATGCTCAGAACAATGTTAGCATCAAGAAAATTTCCAACAATGTTTTAGTTAAGGAAGTTATTGCCGAAGGGTTACCACCAGGATGGGTGAAAAAGACCAGAATCACAACAAAGGAAGATACAATTAGAAAAGATTCGAAGTTTGTGCTACACTTTGTTGCTTCATTGGTAGCGGCGAAAGCACATAATCGAGATAAACGCAATAGCCTTAATTCTCTTCATATCATCCTTGCATCATCCAAATATTACATTGATCCTGTAAGTGGGTATGCACTCAGGTCTTTAAAAGATGTTGATCGCTATCTTGAATCTGGTGAGATAGGAAGGAACGCTTTCAAGCCGAAAGACAGCAGTGATTTGATGTCAAAACCTGACAAATTCTCAAATTCACCTTTTATGTATCAAGTCAGCATAGGAAAAACCCCACAAGCATTCAATGTAGGGATGAGATCAACCCCACCGTCAGCAGGTGTAACCTCGAATCCAACATTATCAGTCAGCACGGGTCTGAGCTCTGATATGGACTTGATAGCCAATGACCATCACATTCCAGAACCTGCATGTTCAGGAGGACATGTGCCCATCTCTGAACATATTTCCGACACTAAAATTATCAGCTCAGTTTTGTCACAAGCAGAAGGTTCAGATCAGAAAGAAGGGCCTTTTGTTTTAGCTGAAGGCAATGTCGTTCCAAGTTGCATAGATGATGCCCAAGAGAGGAAACTTGGAAAAAATGCACAGACAAAACATGGAACTGAAAAAGCCCAAAGTTGCCAGCGCAAAAGGCATAAGAAAGAGATCAATTTGCCTCGACCTAAACAATCAGGTGAGGGAAAAACCATCACAAATGAGGCTAAATCGCCAAACAACTCGTCTAGTGATGCAGCAAAACAGATCAATACAATTAAAGGTGGAACAGAAGAGTGCTTAAATGATGGTGCCACAAACACACCTAAGTCGGGGGAGAGTAAGCATGTTTACGGGAAGTTATCTATTCTGGAAAAGCTTCAAGAGAAGACTGAAGAGCATGGAAGTAACACGGGTCAAGTATGCTTTCCATTTTTGCCACAAGAGAAGCGTGATAATGTTAAAGAGCATGTGACAATCCTTGTAAGTGGAGAGAAGATTGATGAAAAGTTAGATTACTCACTTGACTATCCTCTTGGAGAACTACTAACAGACCCTTGTATTGCATTTGCAATACAAACTCTCACTGGAGTAACATTTGAAACCTCTAAAAACAGTCAAATTCCTTCCGAGTTAACAAACAGCGACCATCCTGAAACTTCTGTTGCTGCCGAAGGGCACGATACTAGAAACATCACAGCGCCGAATATGCTTGATGTTGATGGTAAGGAAGGATGCAATGTATTTTCACCTGCAGACAATTTTGCTATTCCACAACAACACGCTGATGCTGGCGGTCCAGAAATTATTCATAAGGCCAATGAGAATAATACAGGATCATCTTCTGGAAAGACACTAGATATTTCATGGATGGATCCATGTATTGAATTTGCAATAAAAACTCTAACAGGTACTGTGCCATTAGACTCTGATCTAAATCCTAAGAACTGTCTCCAACAACAGCAACATAGTGATATGGCCTTGTCAAGTGTTAGTTTATATAACTTATGCCAAACTGATTACTGTAGCATCCAATATTTTGGTACACAAAAGGCAATGTTTAAACAACAACAACAACAATCTTTTGTTGATCCTACATTACAACAAACCAGAAATGCTGGCATAGGTAATTCTGCCGGAGCCAGACTGCCCCGTCGTGGTGACGATAGAAGGAACTTTTGGCAGAGAATATGTTCTCTGGCTTTCAGGCACTTTTGA 1995 0.4085 MKDSNSDDWLPPGWTVEVRVRKNGQRDKYYFAPLSGLKLKSRVEVFRHLDYAQNNVSIKKISNNVLVKEVIAEGLPPGWVKKTRITTKEDTIRKDSKFVLHFVASLVAAKAHNRDKRNSLNSLHIILASSKYYIDPVSGYALRSLKDVDRYLESGEIGRNAFKPKDSSDLMSKPDKFSNSPFMYQVSIGKTPQAFNVGMRSTPPSAGVTSNPTLSVSTGLSSDMDLIANDHHIPEPACSGGHVPISEHISDTKIISSVLSQAEGSDQKEGPFVLAEGNVVPSCIDDAQERKLGKNAQTKHGTEKAQSCQRKRHKKEINLPRPKQSGEGKTITNEAKSPNNSSSDAAKQINTIKGGTEECLNDGATNTPKSGESKHVYGKLSILEKLQEKTEEHGSNTGQVCFPFLPQEKRDNVKEHVTILVSGEKIDEKLDYSLDYPLGELLTDPCIAFAIQTLTGVTFETSKNSQIPSELTNSDHPETSVAAEGHDTRNITAPNMLDVDGKEGCNVFSPADNFAIPQQHADAGGPEIIHKANENNTGSSSGKTLDISWMDPCIEFAIKTLTGTVPLDSDLNPKNCLQQQQHSDMALSSVSLYNLCQTDYCSIQYFGTQKAMFKQQQQQSFVDPTLQQTRNAGIGNSAGARLPRRGDDRRNFWQRICSLAFRHF 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0818 664 MobiDBLite consensus disorder prediction 290 373 - -
Lal1g0818 664 SUPERFAMILY DNA-binding domain 7 54 IPR016177 GO:0003677
Lal1g0818 664 Pfam Methyl-CpG binding domain 5 57 IPR001739 GO:0003677
Lal1g0818 664 Gene3D - 1 67 - -
Lal1g0818 664 Gene3D - 68 185 - -
Lal1g0818 664 SMART TAM_2 2 73 IPR001739 GO:0003677
Lal1g0818 664 PANTHER OS04G0193200 PROTEIN 1 644 IPR038945 -
Lal1g0818 664 MobiDBLite consensus disorder prediction 325 350 - -
Lal1g0818 664 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 13 1 644 - -
Lal1g0818 664 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 1 70 IPR001739 GO:0003677
Lal1g0818 664 CDD MBD 7 49 - -
Lal1g0818 664 SUPERFAMILY DNA-binding domain 72 157 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0818 Lal-Chr1 5635614 5640915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0818 - - lang:109363276 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0818 1 5635614 5640915 Lal1g0818 1 5635614 5640915 ECH
Lal1g0818 1 5635614 5640915 Lal9g0802 9 5780863 5784378 LSH