Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0790 ATGCCCCAAAACGAAACTCACTGCCACAATGGTGACACCACTCTTACCACAACCCCACAATACCAACATCAACAAGACCAACACCCAATTTTGACCCTTCATCTCAAAGACCCGAAAGACTCTTTTTTGGGCACAAATTCAGACACCCTTTTGGCCATAACAACAATGGCTTCAACAAAATCAGTTTCAATAGACCCTATCCCTTCTTCTTCCTCTGATGACATGGCTGTCAAAGCAGTTAACAAACGCTACGATGGTCTCGTTAAGGTTCGAACCAAAGCGATCAAGGGAAAGGGTGCTTGGTATTGGACCCATTTGGAACCAGTTTTGGTTCGAAACACAGAAACTGGTTTACCCAAATCGGTGAAACTCAAGTGCACGCTCTGTGACTCTGTGTTTTCAGCTTCAAACCCTTCTAGAACCGCTTCTGAGCACTTAAAGCGTGGGACTTGCCCCAATTTCAGCACCGGTTTGAGACCAACCGGTTCGGTTCCTTCCCCTCTTCCAATTTCAATAGTCACCGGTTCGAACCGGAAGAGGGGTTCACCCGGTTCTGCCACCTCACCAACAACTACAACAACAATAACCCCTTATCATCAAAATCACACCTTGGCAATGGTTGAGTCTTCAAGATTCTGTGTTGGTGGTGGTGAAATTGGGTACACTCAGGTGCTTACTAATTCTGTGCACCAGCACCAAAATCAGCAGAATTTGGTGCTGTCTGGTGGGAAAGATGATTTGTGTGCTTTGGCTATGTTTGAGGACAGTGTGAAGAAGCTCAAGAGTCCTAAAACTTCACCTGGTCCTTGTTTGAACAAGGAACAGATTAACTGTGCTTTGGAGTTATTGTCTGATTGGTTCTATGAGTCATGTGGGTCTGTGTCTTTGTCCACTCTTGAGCATAGAAAGTTTCAAGCTTTTCTTAGCCAGGTTGGTTTGTCAACACAGAATTTGAGGCGTGAGATATCTGGTCCTAGGCTTGATGCTAGGTTCAGTGAGGTTAAAGCTGAGTCCGAAGCAAAAATAAGAGATGCAATGTTTTTTCAGGTTGCTAGTGATGGTTGGAAGAACAAGAATTGGTATAGCTTGTGTTGTGGTGGTGAGAATGTGGTTAAGTTTATGGTGAATCTTCCTAATGGGGCTATTGTGTTCCAGAAAGCCGTGTTCACTAGTGGAGTGGTGTCATCAAGGTATGCTGAGGAGATTTTGTGGGAAACAGTGACTGATGTTAGTGGGAGTGTTGTCCAGAGATGTGTAGGGATTGTTGCAGACAAGTTTAAGGCGAAGGCTTTGAGGAACTTGGAGATTCAGAACCATTGGATGGTAAATATTTTTTGTCAACTTCAAGGGTTTGTTAGTTTAATTAAGGATTTTAACCATGAGCTACCACTTTTCATGGTTGTCACTGAGAATTGCCTTAAGGTTGCGAATTTTATAAACACCGAGTCTCAGGTGAGGAATAGTTTTCTCAAATACAGGATGCAGGAGCTGGAGTATGCCGGGCTGCTTAGAGTTCCTTCAACCAAATGTGATGCTTTGAAGGATTTTGCATCTGTGTTTCCAATGCTGGAGGACATTTTGAGCTGTGCTAGAGTAATCCAAATGGTTATGTTGGAGGATACATTTAAGGTAACGTGCATGGAGGATCCCCTGGCAAGAGAAGTAGCTGGAATGGTTCAGAATGAAGTGTTTTGGAATGAACTTGAAGCAGTTTATTCACTTGTGAAGCTTATCAAAATAATGGTTCAGGACATTGAGACTGAGAGGCCATTGATTGGTCGATGCTTGCCTCTTTGGGACGAGCTGAGAACCAAAGTGAAGGAGTGGTGTGGCAAGTACAATGTCATGGAAGGACCAGTGGAAAAGGTAATTGAAAAAAGGTTCAGAAAAAATTACCACCCTGCATGGTCAGCAGCATTTATACTCGATCCACTTTACTTGATTAAAGACGCAAGTGGGAAGTACCTTCCTCCATTCAAGTGCTTGACGCACGAACAGGAGAAAGATGTTGATAAGTTATTGACAAGGCTAGCTTCAAGAGAAGAAGCTCCTATTGTGTTGATGGAGCTAATGAAGTGGAGGTCAGAGGGGCTTGACCCTCTTTATGCACAAGCTGTTCAAATGAAACAAAGAGACCCTGTGACCGGTAAGATGAAAGTTGCAAATCCTCTTAGCAGTAGACTTGTTTGGGAAACATGCTTAAGCGAGTTTAAATCATTGGGCAAGATCGCAGTGAGACTTATTTTTCTGCATGCAACCTCATGCGGATTTAAGTGTAACTGGTCTTTCATGAGGAAAATTTCTGCAAATAAACACTCAAGAGTTGCAGTGGAAAGAGCTCAGAAAATGGTGTATATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTAGCTAATGACGACGAAAAGGACGCAGAATTATTTGCCATGTCTGGTAGTGATGATGGCATGTTAGCTGAGGTGTATGCTGATGCATCCTTAGTGTAA 2487 0.4331 MPQNETHCHNGDTTLTTTPQYQHQQDQHPILTLHLKDPKDSFLGTNSDTLLAITTMASTKSVSIDPIPSSSSDDMAVKAVNKRYDGLVKVRTKAIKGKGAWYWTHLEPVLVRNTETGLPKSVKLKCTLCDSVFSASNPSRTASEHLKRGTCPNFSTGLRPTGSVPSPLPISIVTGSNRKRGSPGSATSPTTTTTITPYHQNHTLAMVESSRFCVGGGEIGYTQVLTNSVHQHQNQQNLVLSGGKDDLCALAMFEDSVKKLKSPKTSPGPCLNKEQINCALELLSDWFYESCGSVSLSTLEHRKFQAFLSQVGLSTQNLRREISGPRLDARFSEVKAESEAKIRDAMFFQVASDGWKNKNWYSLCCGGENVVKFMVNLPNGAIVFQKAVFTSGVVSSRYAEEILWETVTDVSGSVVQRCVGIVADKFKAKALRNLEIQNHWMVNIFCQLQGFVSLIKDFNHELPLFMVVTENCLKVANFINTESQVRNSFLKYRMQELEYAGLLRVPSTKCDALKDFASVFPMLEDILSCARVIQMVMLEDTFKVTCMEDPLAREVAGMVQNEVFWNELEAVYSLVKLIKIMVQDIETERPLIGRCLPLWDELRTKVKEWCGKYNVMEGPVEKVIEKRFRKNYHPAWSAAFILDPLYLIKDASGKYLPPFKCLTHEQEKDVDKLLTRLASREEAPIVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKCNWSFMRKISANKHSRVAVERAQKMVYIAAHAKLERRDLANDDEKDAELFAMSGSDDGMLAEVYADASLV 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0790 828 MobiDBLite consensus disorder prediction 1 27 - -
Lal1g0790 828 SUPERFAMILY Ribonuclease H-like 400 793 IPR012337 -
Lal1g0790 828 PANTHER PUTATIVE ISOFORM 1-RELATED 67 824 - -
Lal1g0790 828 PANTHER OSJNBA0013A04.12 PROTEIN 67 824 - -
Lal1g0790 828 MobiDBLite consensus disorder prediction 173 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0790 Lal-Chr1 5364154 5366640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0790 - - gmx:100814598 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0790 1 5364154 5366640 Lal2g0792 2 5088781 5091270 ECH
Lal1g0790 1 5364154 5366640 Lal1g0790 1 5364154 5366640 ECH
Lal1g0790 1 5364154 5366640 Lal9g0759 9 5325022 5327624 LSH