Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0788 ATGGGTAATACGGTGTGTTTATTCGGTGGATGCATTCCGCAATCAAACGTTGGGGTGGTGGAGCAGTGGGGCCGGTTCCAAAGGCTAGCCCAACCCGGTTTCCATTTCTTCAACCCTTTCGCCGGAGAGTGGCTCGCCGGCGTCCTCTCCACCAGGATCTCCTCCCTTGACGTCCGTATCGAGACCAAAACTAAGGATAATGTGTTTGTGCAATTGCTTTGCTCAATTCAGTACCGTGTAATTAAAGAAAATGCTGATGATGCTTTCTATGAATTGCAAAACCCTAAGGAACAAATCCAGGCTTATGTTTTTGATGTCACACGTGCTATTGTTCCGAGAATGAATTTGGATGAACTCTTTGAGCAGAAGGGTGAAGTTGCCAAAGCTGTGTTGGAGGAACTTGAAAAGGTGATGGGAGAATATGGATATAACATAGAGCATATACTGATGGTTGATATTATACCCGATGATTCTGTGCGGAGGGCAATGAATGAGATTAATGCAGCTCAAAGGATGCAACTAGCTAGTGTATACAAAGGAGAAGCTGAAAAGATCCTTCAAGTTAAAAAAGCGGAAGCTGAGGCTGAAGCCAAGTATCTGGGTGGGGTCGGTGTGGCCAGGCAGCGGCAAGCTATAACCGATGGCTTGAGAGAGAATATCCTGAATTTCTCTCACAAGGTAGAAGGCACTTCTGCTAAGGAGGTGATGGATCTAATCATGATTACTCAGTACTTCGACACAATCAAAGACCTTGGGAACTCATCAAAGAATACCACAGTTTTTATACCCCATGGACCTGGCCATGTTAGGGATATTGGTGAGCAGATACGCAATGGACTAATGGAATCGGCCAGTGCTCAAATCGGTTAG 870 0.4552 MGNTVCLFGGCIPQSNVGVVEQWGRFQRLAQPGFHFFNPFAGEWLAGVLSTRISSLDVRIETKTKDNVFVQLLCSIQYRVIKENADDAFYELQNPKEQIQAYVFDVTRAIVPRMNLDELFEQKGEVAKAVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASVYKGEAEKILQVKKAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMESASAQIG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0788 289 Pfam SPFH domain / Band 7 family 12 193 IPR001107 -
Lal1g0788 289 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 1 287 - -
Lal1g0788 289 SUPERFAMILY Band 7/SPFH domain 48 172 IPR036013 -
Lal1g0788 289 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 287 - -
Lal1g0788 289 CDD SPFH_like_u4 11 280 - -
Lal1g0788 289 Gene3D Band 7 domain 46 169 IPR036013 -
Lal1g0788 289 SMART PHB_4 11 167 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0788 Lal-Chr1 5341751 5345479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0788 - - gmx:100788194 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0788 1 5341751 5345479 Lal1g0788 1 5341751 5345479 ECH