Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0780 ATGGGGGAACAACAAATGAAATTGGTAGTAGTGCCATTTATATTGCTTTTTCTGGCTAGTTTTCCATGCAAATCAAAAGGGTCTCTGCTACCATTTATAGATAGTCCAGGCAATATCTTGTCTGATCTTTGGTCTGATAGTTTCCCCGATCCGTTTCGTGTACTCGAGCAAATCCCATTCGGGGTTGTCAAACATGAGCCATCATCAATGGCTCTTTCACCTGCAAGAGTGGATTGGAAGGAGACAGCAGAGGGGCATGTTATAATGCTGGATGTGCCAGGGTTGAAGAAAGATGAGATAAAGATAGAAGTGGAAGGGAACAGGGTTTTGAGAGTGAGTGGAGAAAGGAAGAAAGAAGAGGAAAAGAAAGGGGATCACTGGCACAGAGTGGAGAGATCCTATGGCAAGTTCTGGAGACAGTTCAAGTTACCAGAAAATGTGGACTTGGATTCTGTGAAGGCTAAGCTGGAGAATGGGGTGCTTACTTTGACATTGAACAAGTTATCACCTGATAAGATCAAAGGTCCAAGGCTGGTGAACATTGCAGGTGATGATGAGAAACAAGACAAGCTTGAAGGCAATGAGACCAAGCAGGAGCTTTGA 603 0.4395 MGEQQMKLVVVPFILLFLASFPCKSKGSLLPFIDSPGNILSDLWSDSFPDPFRVLEQIPFGVVKHEPSSMALSPARVDWKETAEGHVIMLDVPGLKKDEIKIEVEGNRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFKLPENVDLDSVKAKLENGVLTLTLNKLSPDKIKGPRLVNIAGDDEKQDKLEGNETKQEL 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0780 200 ProSiteProfiles CS domain profile. 72 179 IPR007052 -
Lal1g0780 200 Pfam Hsp20/alpha crystallin family 78 181 IPR002068 -
Lal1g0780 200 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 66 184 IPR002068 -
Lal1g0780 200 Gene3D - 37 182 IPR008978 -
Lal1g0780 200 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 16 190 - -
Lal1g0780 200 MobiDBLite consensus disorder prediction 179 200 - -
Lal1g0780 200 CDD ACD_ScHsp26_like 76 167 - -
Lal1g0780 200 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 16 190 - -
Lal1g0780 200 SUPERFAMILY HSP20-like chaperones 45 174 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0780 Lal-Chr1 5305114 5305716 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0780 K13993 - gmx:547971 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0780 1 5305114 5305716 Lal1g0780 1 5305114 5305716 ECH