Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0778 ATGGGCGTTGGTATACAAGGCAAGCTCCATCAAGCTCTTGGCTCTATAAAAGATCACGCATCAATTGTCAAAGCCATGATTTATCACCACCGATATGATGGATTTTCCAGCATAGAGATTGCAGTGCTCTGTGCCACCGGCCATGATAATGGCACCATTGATGACAAATACATGCATGGAATCCTTTTCCATGTATCAAACTCTCCAGGCTCCATTCCTTTTCTTGCTGAAAGGATTTCACGTCGTCTATGCAAAACTAAGGACCATCTTGTGGCCCTCAAGACCCTTGTCTTGATTCATCGCCTTCTCCGGGGAGGAAACATGAACTTTGAGAAAGAGCTATGCAAAGCACATGTCTCTGGCCATCTACAAATCAGTATAAGGTGTTTCAGAAAGAATGACTCTGATCCTTCAGTTAGTTTCCTGCACAAATATGCAGCATATCTTGAAGAACGGATGAGTTGGCTCATAAATCAAGCAGGGAAGCTTGAACCTATTATGTCCAAGGGGTTAGAATTTTGGCGATATGATGAGAAATCCATTGATATGGTATTTCGTACATTGCCTAAATGCCAAGTGCTCATTGATAAGGTGTTAGAATGCACACCATCACATGATACTTTGCACTCGGATCATAACCTAGCTCAAGCTGCTATGAGCAACACCTTGAGAGAAAGCTTCCAAGTTTATATGACATTTTCTGAAGGCATTGCAGCTCTTGTCAATATGATCTTTGATTTAACAGTATCAGCTAGAGGCCTAGCTTGTGAAATACTCAAGAAAGCTTCACCACAGAGCCAAAAGCTTCATGATCTGTACGAAAGTTGTAAGAAAATGGTTGAAAACAAGAATTTGGAATACCCTTTTGTTCAAATTATCAGTATGGATCATATAATGGCACTGGATCAATTTAGTAGTCCACAAAATCAACTTGCAGCTTCAAATGTCTCTCTATCAAGTAGAAAGAGTCCACATCCAATTTTAGGCCATTTCAAAAGATCAACAAAGGTAGAGTTGGCAGTGGCAGCAAAAGAAGGCAAAAGGAATGAAGAGAAAATTGACATAAATTTGTCACCATCACTTTTTTCACGGACACTAGAGACAAAAATAAGCAACGTGTGGGTGGTATTTGAAGATGAAGCACCAAATGAATCACAGGTCCTTCCAGCACAACAAAAACTTGGAGATGCTGATGCTGTTAATGATAAAGAGAATGAATACAATAGGCCAAGTCTATTCCTGAATCCATTTTCATCTAGTATAGATACAACATAA 1275 0.3976 MGVGIQGKLHQALGSIKDHASIVKAMIYHHRYDGFSSIEIAVLCATGHDNGTIDDKYMHGILFHVSNSPGSIPFLAERISRRLCKTKDHLVALKTLVLIHRLLRGGNMNFEKELCKAHVSGHLQISIRCFRKNDSDPSVSFLHKYAAYLEERMSWLINQAGKLEPIMSKGLEFWRYDEKSIDMVFRTLPKCQVLIDKVLECTPSHDTLHSDHNLAQAAMSNTLRESFQVYMTFSEGIAALVNMIFDLTVSARGLACEILKKASPQSQKLHDLYESCKKMVENKNLEYPFVQIISMDHIMALDQFSSPQNQLAASNVSLSSRKSPHPILGHFKRSTKVELAVAAKEGKRNEEKIDINLSPSLFSRTLETKISNVWVVFEDEAPNESQVLPAQQKLGDADAVNDKENEYNRPSLFLNPFSSSIDTT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0778 424 Pfam ANTH domain 38 305 IPR011417 GO:0005543
Lal1g0778 424 ProSiteProfiles ENTH domain profile. 30 163 IPR013809 -
Lal1g0778 424 Gene3D ANTH domain 174 321 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lal1g0778 424 PANTHER CLATHRIN ASSEMBLY PROTEIN-RELATED 1 386 - -
Lal1g0778 424 SUPERFAMILY GAT-like domain 175 304 - -
Lal1g0778 424 SMART enth_2 36 165 IPR013809 -
Lal1g0778 424 SUPERFAMILY ENTH/VHS domain 37 154 IPR008942 -
Lal1g0778 424 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 386 IPR045192 GO:0048268|GO:0072583
Lal1g0778 424 Gene3D - 8 157 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0778 Lal-Chr1 5284710 5285984 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0778 - - gmx:100808531 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0778 1 5284710 5285984 Lal1g0778 1 5284710 5285984 ECH