Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0576 ATGGGTAGAATTTTTACTGTGGAGTTGGAAGGCAGGTCCTATTGCTGCAAATTCTGCAAAACCCACCTCGCTCTTGTCGATGATCTCATCTCCCTGACATTTTATTGCCAACGGGGAAAAGCGTATCTCTTCAGTAATGTTGTGAACTTCACAATTGGAGAACTAGAGGAAAGGTCGATGATTTCGGGTTTGCACACTGTTGCAGATATTTATTGCTGTCGCTGTGGTCAAATAATTGGCTGGAAATATGAGATTGCACATGAGAAGAACCAAAAGTATAAAGAAGGGAAGTTTGTTCTTGAAAGAGGAAGGATTGTCGACGAAATTGATTTCTCCACCACTGAATTCTATATGGAGAGCCATGCCAACATGAGTGATGCTGAAGATGCTTAG 393 0.4173 MGRIFTVELEGRSYCCKFCKTHLALVDDLISLTFYCQRGKAYLFSNVVNFTIGELEERSMISGLHTVADIYCCRCGQIIGWKYEIAHEKNQKYKEGKFVLERGRIVDEIDFSTTEFYMESHANMSDAEDA 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0576 130 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Lal1g0576 130 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 105 IPR004910 -
Lal1g0576 130 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 130 IPR039058 -
Lal1g0576 130 PANTHER PROTEIN YIPPEE-LIKE 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0576 Lal-Chr1 3689330 3692797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0576 - - gmx:100305822 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0576 1 3689330 3692797 Lal1g0576 1 3689330 3692797 ECH