Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0573 ATGAGTGGTGTGCAACTGCAAAGTACTTCCCCTGCCTTGACCTTACAAGGGTCACAGCGAGCTGAAGGTTCAGTGACTGTGGTAACTGGTGCAGAGTCAAAGCCGAAGAAGAAAATCTGCTGTGCTTGCCCAGACACTAAGAAGCTGCGAGATGAATGCATAGTAGAGAATGGCGAAGACGCTTGTACAAAATGGATTGAAGCTCACCGGCAGTGCCTCCGTTCTGAGGGATTCAATGTTTGA 243 0.4897 MSGVQLQSTSPALTLQGSQRAEGSVTVVTGAESKPKKKICCACPDTKKLRDECIVENGEDACTKWIEAHRQCLRSEGFNV 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0573 80 Pfam Cytochrome C oxidase copper chaperone (COX17) 36 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
Lal1g0573 80 Gene3D CytochromE C oxidase copper chaperone 18 80 - -
Lal1g0573 80 MobiDBLite consensus disorder prediction 1 20 - -
Lal1g0573 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 - -
Lal1g0573 80 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 40 80 - -
Lal1g0573 80 SUPERFAMILY Cysteine alpha-hairpin motif 26 80 IPR009069 -
Lal1g0573 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0573 Lal-Chr1 3678136 3680689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0573 K02260 - gmx:100779570 142.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0573 1 3678136 3680689 Lal1g0573 1 3678136 3680689 ECH